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The map label for this gene is bchD [H]

Identifier: 83591826

GI number: 83591826

Start: 570084

End: 571901

Strand: Direct

Name: bchD [H]

Synonym: Rru_A0486

Alternate gene names: 83591826

Gene position: 570084-571901 (Clockwise)

Preceding gene: 83591825

Following gene: 83591827

Centisome position: 13.1

GC content: 73.65

Gene sequence:

>1818_bases
ATGACCGCGCCGGCCGCCTTTAACCCGCTGACCTGGGACGAGGCGGCCCGCGCCGCGGCCATGGTCGCCGTCGATCCGGT
CGGCCTGGGCGGCGCGGTGATCCGCGCCCTGCCCGGACCGCCGCGCGACCGCTGGCTGGCCTATCTGCGCGAGCTGCTGC
CCGCCGACGCGCCTTTGCGCCGGATGCCCCTGCATATCTCCGACGACCGCCTGCTCGGCGGTCTGGATCTGGCCGCGACC
CTGCGCGCCGGTCGGCCGGTGGCCCAGCGCGGCCTGCTGGCCGAGGCCCATAACGGCATCGTCGTGCTGGCGATGGCCGA
GCGCGCCCCGGTGGGCACCGTGGCCCAACTGTGTTCGGTGATCGATTGCGGCGAGGTGCGCACCGAACGCGATGGCCTTG
GCCTGCGCTCGCCCGCCCATCTCGGCGTGGTGGCGCTGGACGAGGGACTGGAGGAGGACGAGCATCCCCTGGCCTCGCTG
GTCGATCGTCTGGCGATCTCGCTTGATCTTGGACCTTTGCGCGATCTGTCCGACGATGGCGAACTGCCCGATGCCGATAT
GGTTCAGGCCGCCCGCGAGAACCTGGGCGCCGTCACCATTCCCGAGACCTTGATCGAAACGCTGTGCGCCACGGCGGCGG
CCTTTGGCATTTTGTCGCTGCGCGTGCCGCTGTTCGCGCTGCGGGTGGCCCGCACCGCCGCCGCCCTGGATGGGCGGACG
GCGGTCGAGGACGCCGATATCATGACGGCGGTGCGGCTGGTGCTGGCGCCGCGCGCCCTGGTGCTGCCGATGCCGCCCGA
GGACGACGCCGAGGATCAGCCGCCCCCGCCGCCCCCGCCCGAGGAGCCCCCCGAGTCCGAGCCCGAACAGAAAAAGGACC
AGGACGATCAGGGCGGTCCGACGCTTGAGGAAATGGCCGTCGCCGCCGCCGCCGCCATCATGCCGGCGGGCATGCTGGCC
CGCCTGCGCGCCGCCGGCGGCTTGCGCCGCAAGGTCACGCCACCGGGCAAGGCCGGGGCGCTCAAGGCCGCCAAGACCCG
GGGCCGTCCGGCCGGAACCCGCCCAGGCGCGCCTGGACCGGGCGCCCGGCTTTCGGTCATCGATACCCTGCGCGCCGCCG
CCCCCTGGCAGCGGGTGCGCCGCGACGAGGAGGCCGCGCGCCTGGGCGACGAGGGTGTTCCGCCAGCCGAGGGCGGCCCC
GCCGGTCCGCGTGTGCTGGTCCGCCCCGATGATTTCCGGGTGACGCGCCTGCGCCAGCGGGCCCAGACGACGACGATCTT
TGTCGTCGACGCCTCGGGATCCTCGGCCCTGCACCGCTTGGCCGAGGCCAAGGGCGCGGTGGAACTGCTGCTGGCCGATT
GCTATGTGCGCCGCGATCAGGTGGCCCTGGTCGCCTTCCGCGGGGCGCGGGCCGATGTCTTGCTGCCGCCGACGCGCTCG
CTGGTGCGCGCCAAGCGCAGTTTGCAGCGGCTGCCCGGCGGCGGCGGCACCCCCCTGGCCTCGGGCCTCGACGCCGCGAC
CGCCCTGGCCGAATTGTGCCAGCGGCGCGGGGAAACCCCGGTTCTGGTGGTGCTGACCGATGGGCGGGCCAATGTCGGGC
GCGATGGCACCGGCGGCCGGGCCAAGGCCGAAGCCGATGCCCAATCGGCGGCCCGCGCCCTGCGCGCCATGGGGCTGGGG
GTGCTGTTGGTCGATACCGCGCCGCGTCCCGATCCGCGCGCCCGCAAACTGGCCGAAGAGCTTGACGCTTGCTACCTCGC
CTTGCCCCACGCCGATGCGATGGCTATATCGCAAGGCGTTCGTGCGGCGATGACCTGA

Upstream 100 bases:

>100_bases
TCGCCCCCTCGGCCCTGCGTCACCGCCTGCGGCGCGATCCTTTGGACGAGGCCGGCTCTACCATTCGCGTTCAGCGCGGG
ATCGAGGCCGTTCTCGGATC

Downstream 100 bases:

>100_bases
GCAGGTCACGCCGACGACCCTTGGGGGACATCTAGGGTGTGTGTGGCATGATGTGTGTGGGTGGCAAAATGATTTGGGAG
CGCGAGGGCAAGACCTGGCC

Product: magnesium chelatase subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MTAPAAFNPLTWDEAARAAAMVAVDPVGLGGAVIRALPGPPRDRWLAYLRELLPADAPLRRMPLHISDDRLLGGLDLAAT
LRAGRPVAQRGLLAEAHNGIVVLAMAERAPVGTVAQLCSVIDCGEVRTERDGLGLRSPAHLGVVALDEGLEEDEHPLASL
VDRLAISLDLGPLRDLSDDGELPDADMVQAARENLGAVTIPETLIETLCATAAAFGILSLRVPLFALRVARTAAALDGRT
AVEDADIMTAVRLVLAPRALVLPMPPEDDAEDQPPPPPPPEEPPESEPEQKKDQDDQGGPTLEEMAVAAAAAIMPAGMLA
RLRAAGGLRRKVTPPGKAGALKAAKTRGRPAGTRPGAPGPGARLSVIDTLRAAAPWQRVRRDEEAARLGDEGVPPAEGGP
AGPRVLVRPDDFRVTRLRQRAQTTTIFVVDASGSSALHRLAEAKGAVELLLADCYVRRDQVALVAFRGARADVLLPPTRS
LVRAKRSLQRLPGGGGTPLASGLDAATALAELCQRRGETPVLVVLTDGRANVGRDGTGGRAKAEADAQSAARALRAMGLG
VLLVDTAPRPDPRARKLAEELDACYLALPHADAMAISQGVRAAMT

Sequences:

>Translated_605_residues
MTAPAAFNPLTWDEAARAAAMVAVDPVGLGGAVIRALPGPPRDRWLAYLRELLPADAPLRRMPLHISDDRLLGGLDLAAT
LRAGRPVAQRGLLAEAHNGIVVLAMAERAPVGTVAQLCSVIDCGEVRTERDGLGLRSPAHLGVVALDEGLEEDEHPLASL
VDRLAISLDLGPLRDLSDDGELPDADMVQAARENLGAVTIPETLIETLCATAAAFGILSLRVPLFALRVARTAAALDGRT
AVEDADIMTAVRLVLAPRALVLPMPPEDDAEDQPPPPPPPEEPPESEPEQKKDQDDQGGPTLEEMAVAAAAAIMPAGMLA
RLRAAGGLRRKVTPPGKAGALKAAKTRGRPAGTRPGAPGPGARLSVIDTLRAAAPWQRVRRDEEAARLGDEGVPPAEGGP
AGPRVLVRPDDFRVTRLRQRAQTTTIFVVDASGSSALHRLAEAKGAVELLLADCYVRRDQVALVAFRGARADVLLPPTRS
LVRAKRSLQRLPGGGGTPLASGLDAATALAELCQRRGETPVLVVLTDGRANVGRDGTGGRAKAEADAQSAARALRAMGLG
VLLVDTAPRPDPRARKLAEELDACYLALPHADAMAISQGVRAAMT
>Mature_604_residues
TAPAAFNPLTWDEAARAAAMVAVDPVGLGGAVIRALPGPPRDRWLAYLRELLPADAPLRRMPLHISDDRLLGGLDLAATL
RAGRPVAQRGLLAEAHNGIVVLAMAERAPVGTVAQLCSVIDCGEVRTERDGLGLRSPAHLGVVALDEGLEEDEHPLASLV
DRLAISLDLGPLRDLSDDGELPDADMVQAARENLGAVTIPETLIETLCATAAAFGILSLRVPLFALRVARTAAALDGRTA
VEDADIMTAVRLVLAPRALVLPMPPEDDAEDQPPPPPPPEEPPESEPEQKKDQDDQGGPTLEEMAVAAAAAIMPAGMLAR
LRAAGGLRRKVTPPGKAGALKAAKTRGRPAGTRPGAPGPGARLSVIDTLRAAAPWQRVRRDEEAARLGDEGVPPAEGGPA
GPRVLVRPDDFRVTRLRQRAQTTTIFVVDASGSSALHRLAEAKGAVELLLADCYVRRDQVALVAFRGARADVLLPPTRSL
VRAKRSLQRLPGGGGTPLASGLDAATALAELCQRRGETPVLVVLTDGRANVGRDGTGGRAKAEADAQSAARALRAMGLGV
LLVDTAPRPDPRARKLAEELDACYLALPHADAMAISQGVRAAMT

Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011776
- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 63281; Mature: 63150

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPAAFNPLTWDEAARAAAMVAVDPVGLGGAVIRALPGPPRDRWLAYLRELLPADAPLR
CCCCCCCCCCCHHHHHHHEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCHH
RMPLHISDDRLLGGLDLAATLRAGRPVAQRGLLAEAHNGIVVLAMAERAPVGTVAQLCSV
HCCCEECCCCCCCCCHHHHHHHCCCCHHHHCCHHCCCCCEEEEEECCCCCHHHHHHHHHH
IDCGEVRTERDGLGLRSPAHLGVVALDEGLEEDEHPLASLVDRLAISLDLGPLRDLSDDG
HHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
ELPDADMVQAARENLGAVTIPETLIETLCATAAAFGILSLRVPLFALRVARTAAALDGRT
CCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AVEDADIMTAVRLVLAPRALVLPMPPEDDAEDQPPPPPPPEEPPESEPEQKKDQDDQGGP
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
TLEEMAVAAAAAIMPAGMLARLRAAGGLRRKVTPPGKAGALKAAKTRGRPAGTRPGAPGP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GARLSVIDTLRAAAPWQRVRRDEEAARLGDEGVPPAEGGPAGPRVLVRPDDFRVTRLRQR
CCEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH
AQTTTIFVVDASGSSALHRLAEAKGAVELLLADCYVRRDQVALVAFRGARADVLLPPTRS
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHH
LVRAKRSLQRLPGGGGTPLASGLDAATALAELCQRRGETPVLVVLTDGRANVGRDGTGGR
HHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
AKAEADAQSAARALRAMGLGVLLVDTAPRPDPRARKLAEELDACYLALPHADAMAISQGV
CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHH
RAAMT
HHHCC
>Mature Secondary Structure 
TAPAAFNPLTWDEAARAAAMVAVDPVGLGGAVIRALPGPPRDRWLAYLRELLPADAPLR
CCCCCCCCCCHHHHHHHEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCHH
RMPLHISDDRLLGGLDLAATLRAGRPVAQRGLLAEAHNGIVVLAMAERAPVGTVAQLCSV
HCCCEECCCCCCCCCHHHHHHHCCCCHHHHCCHHCCCCCEEEEEECCCCCHHHHHHHHHH
IDCGEVRTERDGLGLRSPAHLGVVALDEGLEEDEHPLASLVDRLAISLDLGPLRDLSDDG
HHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
ELPDADMVQAARENLGAVTIPETLIETLCATAAAFGILSLRVPLFALRVARTAAALDGRT
CCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AVEDADIMTAVRLVLAPRALVLPMPPEDDAEDQPPPPPPPEEPPESEPEQKKDQDDQGGP
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
TLEEMAVAAAAAIMPAGMLARLRAAGGLRRKVTPPGKAGALKAAKTRGRPAGTRPGAPGP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
GARLSVIDTLRAAAPWQRVRRDEEAARLGDEGVPPAEGGPAGPRVLVRPDDFRVTRLRQR
CCEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH
AQTTTIFVVDASGSSALHRLAEAKGAVELLLADCYVRRDQVALVAFRGARADVLLPPTRS
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHH
LVRAKRSLQRLPGGGGTPLASGLDAATALAELCQRRGETPVLVVLTDGRANVGRDGTGGR
HHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
AKAEADAQSAARALRAMGLGVLLVDTAPRPDPRARKLAEELDACYLALPHADAMAISQGV
CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHHHH
RAAMT
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA