| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591643
Identifier: 83591643
GI number: 83591643
Start: 370032
End: 371339
Strand: Direct
Name: 83591643
Synonym: Rru_A0303
Alternate gene names: NA
Gene position: 370032-371339 (Clockwise)
Preceding gene: 83591642
Following gene: 83591649
Centisome position: 8.5
GC content: 42.2
Gene sequence:
>1308_bases ATGGAAAACCACGTTGTCCGACACAAAGGAGACCTGGTTGCCGTTCTAGATAGCTATCGAGATTGTTTGTTTAGAGGGCA GGTCGAGGAATACAATGTTGGTCATGATGAAATAATTTTCAAAACATCATTTTATCGGAATAAATGTCATCCAGAAACCA TGGTAAAATGGTCTTTTTATGCGGAACGAATTTTCCGGCGTTTTTTTTCTATAGGAATGGATAATGTAAATTCTAATTCT AAAAATATGATCTATCAGGCTGTATCTCAGCACTATGGATGGCGGTCATTTTTTGTCGATGCTTCCTGTAACCCTGCCGT CTCAGCATGGTTTGCGGCAAAGAGATATTCTCAAAAGAATATATTAGAAATGACGGAGGATTGTCATGAAGTTGGCATCT TCTTTCTCAATAACGCTGCCACCTACACGGATCACGATGGTATCGGCTTTTTGTATGTTCTTAACAAAGAGGCATTAGTA GAATCCAAGGTACCGTTAGTGTGCCTGTCGGGAGGCTCTGATGATGGCTACCGCTACAGATTTAATGCGCAACATGCATG GATGCTTGGGCCTGTTCCCAAGGGAATTCCCGCAAAATGCGTCATTGCTAGAATAGAGTCCCCTGCCGAAATACTCAGAG AGTACGCGAGAGATAGTGGTTTTGATAGCACGCAGTCGATGTTTCCTGACAGTATGGAAGATCCGTGCCTCAAGCTTCTG CTTTCTATTCCGTGTATTGTGCATCCGAAATCAAATAAAGATCACATAAAATTATTTGTCCGCCATCTCGAAATACCAAA TTATCATTATCAGCCATCGAAGGTCCATGATGATTGTCACGCCTTCTATGCAGGTAGCAGAATAGGGGAAGCGAGTCGCA TCATTGATGAGACGCTTGTCAATGCATTTATTTTGACGGTCCCAGATTTCGTAATGTTCGGTCGTCGTGTTGACGGTGAG GAAATAAGCACTCCAATTATTGTGGCGCTTGTCGCAAAGCATGGGCGCGTCGGCATAGAAATTAATGGATTGATTAGAAT TCCAGACTGGAAAGTTGGCAGTATATATTCAAAAGGTTTATTCCTTGTTATGCAAGATGATCTTTCAATAATTGTCAGTG ATTTGATCGTTGAGCATCCAGGAACTGTCATGGTCAATTCTGGAATTACGAACGGTTGGCGTTATACAATCGATGAAAAA AACCACTGGGTTAGGATGCCCCATCCCGATGATTGTCCATGTGGAAATGACCTTCTCCATGATCACCATCTAACGGTTTT GCTGCGAGTTGAAGATTTTCTTCGGTAA
Upstream 100 bases:
>100_bases CAATGCAGTGATTAAACCCATGAGCGAAATAGAAAATTCGCTATACTGGCAGTGAATTTCCGCAGTCTGCTAGGCTGGAC GGCTCGGGAGTGATCATACA
Downstream 100 bases:
>100_bases GTCGGTTCTCTACACGCCAGTGAGCTTTTGAGACATATTTCAGGGAGCAACCATCTCCCTTCCAGCCAAATTTTTCCAGA ACAAGACACAGACGCAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MENHVVRHKGDLVAVLDSYRDCLFRGQVEEYNVGHDEIIFKTSFYRNKCHPETMVKWSFYAERIFRRFFSIGMDNVNSNS KNMIYQAVSQHYGWRSFFVDASCNPAVSAWFAAKRYSQKNILEMTEDCHEVGIFFLNNAATYTDHDGIGFLYVLNKEALV ESKVPLVCLSGGSDDGYRYRFNAQHAWMLGPVPKGIPAKCVIARIESPAEILREYARDSGFDSTQSMFPDSMEDPCLKLL LSIPCIVHPKSNKDHIKLFVRHLEIPNYHYQPSKVHDDCHAFYAGSRIGEASRIIDETLVNAFILTVPDFVMFGRRVDGE EISTPIIVALVAKHGRVGIEINGLIRIPDWKVGSIYSKGLFLVMQDDLSIIVSDLIVEHPGTVMVNSGITNGWRYTIDEK NHWVRMPHPDDCPCGNDLLHDHHLTVLLRVEDFLR
Sequences:
>Translated_435_residues MENHVVRHKGDLVAVLDSYRDCLFRGQVEEYNVGHDEIIFKTSFYRNKCHPETMVKWSFYAERIFRRFFSIGMDNVNSNS KNMIYQAVSQHYGWRSFFVDASCNPAVSAWFAAKRYSQKNILEMTEDCHEVGIFFLNNAATYTDHDGIGFLYVLNKEALV ESKVPLVCLSGGSDDGYRYRFNAQHAWMLGPVPKGIPAKCVIARIESPAEILREYARDSGFDSTQSMFPDSMEDPCLKLL LSIPCIVHPKSNKDHIKLFVRHLEIPNYHYQPSKVHDDCHAFYAGSRIGEASRIIDETLVNAFILTVPDFVMFGRRVDGE EISTPIIVALVAKHGRVGIEINGLIRIPDWKVGSIYSKGLFLVMQDDLSIIVSDLIVEHPGTVMVNSGITNGWRYTIDEK NHWVRMPHPDDCPCGNDLLHDHHLTVLLRVEDFLR >Mature_435_residues MENHVVRHKGDLVAVLDSYRDCLFRGQVEEYNVGHDEIIFKTSFYRNKCHPETMVKWSFYAERIFRRFFSIGMDNVNSNS KNMIYQAVSQHYGWRSFFVDASCNPAVSAWFAAKRYSQKNILEMTEDCHEVGIFFLNNAATYTDHDGIGFLYVLNKEALV ESKVPLVCLSGGSDDGYRYRFNAQHAWMLGPVPKGIPAKCVIARIESPAEILREYARDSGFDSTQSMFPDSMEDPCLKLL LSIPCIVHPKSNKDHIKLFVRHLEIPNYHYQPSKVHDDCHAFYAGSRIGEASRIIDETLVNAFILTVPDFVMFGRRVDGE EISTPIIVALVAKHGRVGIEINGLIRIPDWKVGSIYSKGLFLVMQDDLSIIVSDLIVEHPGTVMVNSGITNGWRYTIDEK NHWVRMPHPDDCPCGNDLLHDHHLTVLLRVEDFLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49693; Mature: 49693
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENHVVRHKGDLVAVLDSYRDCLFRGQVEEYNVGHDEIIFKTSFYRNKCHPETMVKWSFY CCCCEEECCCCEEEEHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH AERIFRRFFSIGMDNVNSNSKNMIYQAVSQHYGWRSFFVDASCNPAVSAWFAAKRYSQKN HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHH ILEMTEDCHEVGIFFLNNAATYTDHDGIGFLYVLNKEALVESKVPLVCLSGGSDDGYRYR HHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCEEEEECCCCCCEEEE FNAQHAWMLGPVPKGIPAKCVIARIESPAEILREYARDSGFDSTQSMFPDSMEDPCLKLL ECCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH LSIPCIVHPKSNKDHIKLFVRHLEIPNYHYQPSKVHDDCHAFYAGSRIGEASRIIDETLV HHCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH NAFILTVPDFVMFGRRVDGEEISTPIIVALVAKHGRVGIEINGLIRIPDWKVGSIYSKGL HHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEECCCE FLVMQDDLSIIVSDLIVEHPGTVMVNSGITNGWRYTIDEKNHWVRMPHPDDCPCGNDLLH EEEEECCHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCC DHHLTVLLRVEDFLR CCCEEEEEEEHHHCC >Mature Secondary Structure MENHVVRHKGDLVAVLDSYRDCLFRGQVEEYNVGHDEIIFKTSFYRNKCHPETMVKWSFY CCCCEEECCCCEEEEHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHH AERIFRRFFSIGMDNVNSNSKNMIYQAVSQHYGWRSFFVDASCNPAVSAWFAAKRYSQKN HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHH ILEMTEDCHEVGIFFLNNAATYTDHDGIGFLYVLNKEALVESKVPLVCLSGGSDDGYRYR HHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCHHHHHCCCCEEEEECCCCCCEEEE FNAQHAWMLGPVPKGIPAKCVIARIESPAEILREYARDSGFDSTQSMFPDSMEDPCLKLL ECCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH LSIPCIVHPKSNKDHIKLFVRHLEIPNYHYQPSKVHDDCHAFYAGSRIGEASRIIDETLV HHCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH NAFILTVPDFVMFGRRVDGEEISTPIIVALVAKHGRVGIEINGLIRIPDWKVGSIYSKGL HHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEECCCE FLVMQDDLSIIVSDLIVEHPGTVMVNSGITNGWRYTIDEKNHWVRMPHPDDCPCGNDLLH EEEEECCHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCC DHHLTVLLRVEDFLR CCCEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA