| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591641
Identifier: 83591641
GI number: 83591641
Start: 368120
End: 368533
Strand: Direct
Name: 83591641
Synonym: Rru_A0301
Alternate gene names: NA
Gene position: 368120-368533 (Clockwise)
Preceding gene: 83591640
Following gene: 83591642
Centisome position: 8.46
GC content: 64.01
Gene sequence:
>414_bases ATGGCCACCGTGCGCTTGCTTGATGACGCCGAGATTTCAACCCTGCCCGAGGTCAAGGCGGTGTTCGACGACATCCGCGC GACCCGGGGTAGCGACTTCGTCAATAACATCTGGCGCGGTCTGGCCAATGATCCGGCGCTCCTCAAGCGGACCTGGGAGC AGGTCAAGACCGTGATGGTCGGCGAAGGGGCGCTCGATCCCTTGACCCGCGAGATGATCTATCTGGCGGTCTCGACGGCC AATAGCTGTTCGTATTGCGCCCATTCGCATACGGCGGCGGCCAGGGCCAAGGGCATGACCCCGGCCCAGCATGCCGAGGT GCTGGCGATCATCGGTCTGGCCGCCCAGACCAACGCCCTGGTCACCGCCATGCAGATCCCGGTGGACGAGGCGTTTCTGG TCGACGGCAAATAG
Upstream 100 bases:
>100_bases GGAGTGGGCCCACCGTTAGGGCTGCGGGCGGGAAAGATAGTCCCCCCACACCACCCCAACAGACTGATAGTGAAGAAAAT CCCGAACCGGAGATCCGCCG
Downstream 100 bases:
>100_bases CGCGAAAGACCCTTGGGGAGAGCCGGCGGCGTCGGTTCTCCCCGATGTTTTTGTGGTCGGCATCCACCGCTTCGGAGTAG GGTTGGCTGGCCCGCCCTCG
Product: alkylhydroperoxidase AhpD core
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Family Core Domain-Containing; Carboxymuconolactone Decarboxylase Protein; Alkylhydroperoxidase-Like Protein; Alcohol Dehydrogenase; AhpD Family Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase AhpD Core
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MATVRLLDDAEISTLPEVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMVGEGALDPLTREMIYLAVSTA NSCSYCAHSHTAAARAKGMTPAQHAEVLAIIGLAAQTNALVTAMQIPVDEAFLVDGK
Sequences:
>Translated_137_residues MATVRLLDDAEISTLPEVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMVGEGALDPLTREMIYLAVSTA NSCSYCAHSHTAAARAKGMTPAQHAEVLAIIGLAAQTNALVTAMQIPVDEAFLVDGK >Mature_136_residues ATVRLLDDAEISTLPEVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMVGEGALDPLTREMIYLAVSTAN SCSYCAHSHTAAARAKGMTPAQHAEVLAIIGLAAQTNALVTAMQIPVDEAFLVDGK
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14725; Mature: 14594
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVRLLDDAEISTLPEVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMV CCEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GEGALDPLTREMIYLAVSTANSCSYCAHSHTAAARAKGMTPAQHAEVLAIIGLAAQTNAL CCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH VTAMQIPVDEAFLVDGK EEEEECCCCCEEEECCC >Mature Secondary Structure ATVRLLDDAEISTLPEVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMV CEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GEGALDPLTREMIYLAVSTANSCSYCAHSHTAAARAKGMTPAQHAEVLAIIGLAAQTNAL CCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH VTAMQIPVDEAFLVDGK EEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA