| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is sugE [H]
Identifier: 83591612
GI number: 83591612
Start: 337010
End: 337321
Strand: Direct
Name: sugE [H]
Synonym: Rru_A0272
Alternate gene names: 83591612
Gene position: 337010-337321 (Clockwise)
Preceding gene: 83591611
Following gene: 83591616
Centisome position: 7.74
GC content: 64.42
Gene sequence:
>312_bases ATGGCTTGGGTTTTTCTGGTTCTCGCCGGTTTATGCGAAGTGGGGTGGGCGGTCGGTTTGAAGATGACCGAGGGGTTCAC CCGGTTGGTTCCCTCGCTGCTCACGGCTTTGGCGATGATCGCCAGCCTGGGGCTGCTGGGATTGGCCCTGCGCAGCCTGC CTTTGGGTGTCGGCTACGGCATCTGGGTGGGGATCGGCACCGTCGGGGCGGCGGTCGCCGGCATGGCGCTGTTTGGCGAG GCGGTCAGCGTGGTCAAACTGGCCTCGCTCGGTCTGATCATCGTCGGGCTCATCGGCTTGAAGATCGGCTGA
Upstream 100 bases:
>100_bases GCCTCTGAGGCGAGACTTGTGTTCGTCAGGCGGGGACGACCCCGCTGGAGGTGTTTTTCAGGCGGGGACGACCCCGCCAT GGATCCAGAGGGAGGCATCC
Downstream 100 bases:
>100_bases GGCGATAAAAAAAGGGGGCCTTCGCGGGCCCCCTTTGCCGGTGGGATCGGAGCTTTCGCCCCGGGATCCTTAATACATGT GCTGGCCGCCGTTGATCGAC
Product: small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAWVFLVLAGLCEVGWAVGLKMTEGFTRLVPSLLTALAMIASLGLLGLALRSLPLGVGYGIWVGIGTVGAAVAGMALFGE AVSVVKLASLGLIIVGLIGLKIG
Sequences:
>Translated_103_residues MAWVFLVLAGLCEVGWAVGLKMTEGFTRLVPSLLTALAMIASLGLLGLALRSLPLGVGYGIWVGIGTVGAAVAGMALFGE AVSVVKLASLGLIIVGLIGLKIG >Mature_102_residues AWVFLVLAGLCEVGWAVGLKMTEGFTRLVPSLLTALAMIASLGLLGLALRSLPLGVGYGIWVGIGTVGAAVAGMALFGEA VSVVKLASLGLIIVGLIGLKIG
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=103, Percent_Identity=56.3106796116505, Blast_Score=118, Evalue=8e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 10336; Mature: 10205
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWVFLVLAGLCEVGWAVGLKMTEGFTRLVPSLLTALAMIASLGLLGLALRSLPLGVGYG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IWVGIGTVGAAVAGMALFGEAVSVVKLASLGLIIVGLIGLKIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AWVFLVLAGLCEVGWAVGLKMTEGFTRLVPSLLTALAMIASLGLLGLALRSLPLGVGYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH IWVGIGTVGAAVAGMALFGEAVSVVKLASLGLIIVGLIGLKIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]