| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is crcB
Identifier: 83591576
GI number: 83591576
Start: 293245
End: 293634
Strand: Direct
Name: crcB
Synonym: Rru_A0236
Alternate gene names: 83591576
Gene position: 293245-293634 (Clockwise)
Preceding gene: 161777629
Following gene: 83591577
Centisome position: 6.74
GC content: 62.56
Gene sequence:
>390_bases ATGACCTATTTATTCGTCGCCGCCGGGGGAGCCCTGGGCTCGACCCTGCGCTATTGGCTTTCGGGGTTGATCGCAGGCGC GATCGGCCAAAGCTTTCCCTGGGGAACGCTGGTCATCAATATCAGCGGATCGATCGTCATCGGCGCCTTCGCCACCCTGA CCGGACCCGATGGCCGGGTGTTCATCCCCGGAGACTGGCGCCAGTTCTTCATGGTCGGAGTCTGCGGCGGCTATACCACC TTTTCGTCGTTCAGCCTGCAGACCCTGACCCTGGCCCAAGAGGGCCAGGGGCTGTGGGCGGCGGCCAATGTGGTTTTATC GGTGGTGTTTTGCCTGATCGGCGTCTGGCTCGGACATGTCGGCGCCGTCCTGATCAACGAGGGGGTATGA
Upstream 100 bases:
>100_bases GTGGGACCTTGTGACAACCCGCCATGCCTGCCAAGCAGGAGGAGGCGGGTTTTTTTATGCCCGCCCGGTCCCCATCCATC GGAGGTAAGTGCGCAGCGCC
Downstream 100 bases:
>100_bases CATGGACAGCCAAGACATCCCGGGATTGCCCAAGGACGCCGTGCTGCTGCGCATTTATACCAGCGAGCGGAAGACGTTCG GTCACGCGCCGCTGTTCGAG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTYLFVAAGGALGSTLRYWLSGLIAGAIGQSFPWGTLVINISGSIVIGAFATLTGPDGRVFIPGDWRQFFMVGVCGGYTT FSSFSLQTLTLAQEGQGLWAAANVVLSVVFCLIGVWLGHVGAVLINEGV
Sequences:
>Translated_129_residues MTYLFVAAGGALGSTLRYWLSGLIAGAIGQSFPWGTLVINISGSIVIGAFATLTGPDGRVFIPGDWRQFFMVGVCGGYTT FSSFSLQTLTLAQEGQGLWAAANVVLSVVFCLIGVWLGHVGAVLINEGV >Mature_128_residues TYLFVAAGGALGSTLRYWLSGLIAGAIGQSFPWGTLVINISGSIVIGAFATLTGPDGRVFIPGDWRQFFMVGVCGGYTTF SSFSLQTLTLAQEGQGLWAAANVVLSVVFCLIGVWLGHVGAVLINEGV
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_RHORT (Q2RXV4)
Other databases:
- EMBL: CP000230 - RefSeq: YP_425328.1 - STRING: Q2RXV4 - GeneID: 3834630 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A0236 - NMPDR: fig|1085.1.peg.1508 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: LISELCV - ProtClustDB: PRK14206 - BioCyc: RRUB269796:RRU_A0236-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13449; Mature: 13318
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb727ca4)-; HASH(0xcaac328)-; HASH(0xbd4c624)-; HASH(0xb69e8c4)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLFVAAGGALGSTLRYWLSGLIAGAIGQSFPWGTLVINISGSIVIGAFATLTGPDGRV CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE FIPGDWRQFFMVGVCGGYTTFSSFSLQTLTLAQEGQGLWAAANVVLSVVFCLIGVWLGHV EECCCHHHEEEEEECCCCCHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GAVLINEGV HHHEEECCH >Mature Secondary Structure TYLFVAAGGALGSTLRYWLSGLIAGAIGQSFPWGTLVINISGSIVIGAFATLTGPDGRV EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE FIPGDWRQFFMVGVCGGYTTFSSFSLQTLTLAQEGQGLWAAANVVLSVVFCLIGVWLGHV EECCCHHHEEEEEECCCCCHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GAVLINEGV HHHEEECCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA