| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is gabD [H]
Identifier: 83591474
GI number: 83591474
Start: 157179
End: 158666
Strand: Direct
Name: gabD [H]
Synonym: Rru_A0134
Alternate gene names: 83591474
Gene position: 157179-158666 (Clockwise)
Preceding gene: 83591473
Following gene: 83591475
Centisome position: 3.61
GC content: 67.0
Gene sequence:
>1488_bases ATGCCCGAGGGTACCACGAGGATCGCCGCGCTCGACATCGTGCGTGAGGCCGGTCTGCTCAAGGACAAGGCCTATATCGA CGGCGCCTGGGTCGGCGCCGACGACGGCGGTGATTTCCCCGTGCTCGATCCGGCGACCGGCCGTGAGATCGGCCGCGTTC CCAATATGGGCGCGGCTGAAACCCGCCGGGCCATCGATGCCGCCGCCGCCGCTTGGCCTGCCTGGCGGGCGCGCACCGCC AAGGATCGCGCCGCCGTCTTGCGCCGCTGGTACGGCCTGATCATGGACAACCAGGAAGCCCTGGCCGTGCTGATGACCGC CGAGCAGGGCAAGCCGCTGGGCGAGGCCCGGGGCGAAATCGCCTATGGCGCCAGCTTCGTTGAATGGTTCGCCGAAGAGG GCAAGCGGCTTTACGGCGAGGTCGTGCCCGCCCATGGCACCGACAAGCGCATCCTGACCCTGCGCGAGCCGATCGGCGTG GTCGCCGCCATCACCCCTTGGAACTTCCCCAGCGCCATGATCACCCGCAAGGTGGCCCCGGCCCTGGCGGCGGGCTGTCC GGTGGTGCTCAAGCCGGCCGAGGATACGCCGCTGTCGGCGCTGGCCCTGGTGGAACTGGCCGAGCGGGCCGGCCTGCCCA AGGGGCTGATCAATGTCGTGACCACCCATGAGGCCAAGGCGGTGGGCGGCGAGATGACCGCCAATCCGATCGTGCGCAAG CTGTCGTTCACCGGCTCGACCGAGGTCGGCAAGATCCTGATGGCCCAATGCGCCGGAACGGTGAAGAAGGTCTCGCTTGA ACTGGGCGGCAATGCCCCGTTCATCGTTTTCGACGATGCCGATCTCGAGGCGGCGGTGGCCGGGGCGATCGCCTCGAAGT ACCGCAACGCCGGGCAGACCTGCGTCTGCGCCAACCGGCTTTACGTCCAAGAGGGCATCTACGAGGCCTTCACCGAGAAG CTCAAGGCCAAGGTCGAAGCGATGCGCGTCGGCCCGGCGCTCGAGGGCGATGTTCAGCAGGGGCCGCTGATCAACAAGAA GGGCCTCGACAAGGTCGATGGGTTGGTTCGCGACGCCTTGGACAAAGGGGCGACGGCGGTTCTCGGCGGCAAGGTCCATG CCCTGGGCGGCACCTTCTATGAGCCGACGATCCTGACCGGGGTGACCGCCGCCATGCGGATGGCCACCGAGGAGATCTTC GGGCCGGTGGCGCCGCTCTATCGCTTCTCGACCGAGGCCGAGGCGATCGCTTTGGCCAATGCCACCCGGTTCGGTCTGGC CGCTTATTTCTATACCCGCGATATCGGTCGAGTCTGGCGGGTGGCCGAGGGGCTAGAATACGGCATCGTCGGCATCAACG AGGGGATCATCTCGACCGAATCGGCGCCCTTTGGCGGGGTCAAGGAATCGGGCATCGGCCGCGAAGGCTCGCGCCACGGC ATCGATGACTTCGTCGAGATCAAATATCTGTGCATGGGCGGGATCTGA
Upstream 100 bases:
>100_bases ATTGCGCCCGCGGCCCTGCGCGGACCCTCTTGGGCTCGCGGAAAACTCGGCCTATGGTGGGATGGGTGTTTTGGATCCAA ACCGCAGGAAAGGACTGACC
Downstream 100 bases:
>100_bases AAGCCCGTATTGACGGAAGGGTTGTCGCGGTGTTCCCCTGACTGAAAGGGGAGACCGCGATGACCGAGACAGCGATCACC GGCCAGACGACGGGGCCGGC
Product: succinate semialdehyde dehydrogenase
Products: NA
Alternate protein names: SSDH [H]
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MPEGTTRIAALDIVREAGLLKDKAYIDGAWVGADDGGDFPVLDPATGREIGRVPNMGAAETRRAIDAAAAAWPAWRARTA KDRAAVLRRWYGLIMDNQEALAVLMTAEQGKPLGEARGEIAYGASFVEWFAEEGKRLYGEVVPAHGTDKRILTLREPIGV VAAITPWNFPSAMITRKVAPALAAGCPVVLKPAEDTPLSALALVELAERAGLPKGLINVVTTHEAKAVGGEMTANPIVRK LSFTGSTEVGKILMAQCAGTVKKVSLELGGNAPFIVFDDADLEAAVAGAIASKYRNAGQTCVCANRLYVQEGIYEAFTEK LKAKVEAMRVGPALEGDVQQGPLINKKGLDKVDGLVRDALDKGATAVLGGKVHALGGTFYEPTILTGVTAAMRMATEEIF GPVAPLYRFSTEAEAIALANATRFGLAAYFYTRDIGRVWRVAEGLEYGIVGINEGIISTESAPFGGVKESGIGREGSRHG IDDFVEIKYLCMGGI
Sequences:
>Translated_495_residues MPEGTTRIAALDIVREAGLLKDKAYIDGAWVGADDGGDFPVLDPATGREIGRVPNMGAAETRRAIDAAAAAWPAWRARTA KDRAAVLRRWYGLIMDNQEALAVLMTAEQGKPLGEARGEIAYGASFVEWFAEEGKRLYGEVVPAHGTDKRILTLREPIGV VAAITPWNFPSAMITRKVAPALAAGCPVVLKPAEDTPLSALALVELAERAGLPKGLINVVTTHEAKAVGGEMTANPIVRK LSFTGSTEVGKILMAQCAGTVKKVSLELGGNAPFIVFDDADLEAAVAGAIASKYRNAGQTCVCANRLYVQEGIYEAFTEK LKAKVEAMRVGPALEGDVQQGPLINKKGLDKVDGLVRDALDKGATAVLGGKVHALGGTFYEPTILTGVTAAMRMATEEIF GPVAPLYRFSTEAEAIALANATRFGLAAYFYTRDIGRVWRVAEGLEYGIVGINEGIISTESAPFGGVKESGIGREGSRHG IDDFVEIKYLCMGGI >Mature_494_residues PEGTTRIAALDIVREAGLLKDKAYIDGAWVGADDGGDFPVLDPATGREIGRVPNMGAAETRRAIDAAAAAWPAWRARTAK DRAAVLRRWYGLIMDNQEALAVLMTAEQGKPLGEARGEIAYGASFVEWFAEEGKRLYGEVVPAHGTDKRILTLREPIGVV AAITPWNFPSAMITRKVAPALAAGCPVVLKPAEDTPLSALALVELAERAGLPKGLINVVTTHEAKAVGGEMTANPIVRKL SFTGSTEVGKILMAQCAGTVKKVSLELGGNAPFIVFDDADLEAAVAGAIASKYRNAGQTCVCANRLYVQEGIYEAFTEKL KAKVEAMRVGPALEGDVQQGPLINKKGLDKVDGLVRDALDKGATAVLGGKVHALGGTFYEPTILTGVTAAMRMATEEIFG PVAPLYRFSTEAEAIALANATRFGLAAYFYTRDIGRVWRVAEGLEYGIVGINEGIISTESAPFGGVKESGIGREGSRHGI DDFVEIKYLCMGGI
Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507229, Length=495, Percent_Identity=54.9494949494949, Blast_Score=518, Evalue=1e-147, Organism=Homo sapiens, GI25777721, Length=508, Percent_Identity=53.3464566929134, Blast_Score=507, Evalue=1e-144, Organism=Homo sapiens, GI25777730, Length=473, Percent_Identity=38.9006342494715, Blast_Score=314, Evalue=1e-85, Organism=Homo sapiens, GI25777724, Length=476, Percent_Identity=38.0252100840336, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI115387104, Length=466, Percent_Identity=37.1244635193133, Blast_Score=297, Evalue=2e-80, Organism=Homo sapiens, GI12007648, Length=481, Percent_Identity=36.3825363825364, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI153266822, Length=473, Percent_Identity=37.2093023255814, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI238814322, Length=479, Percent_Identity=35.4906054279749, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI21361176, Length=473, Percent_Identity=36.3636363636364, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI21614513, Length=478, Percent_Identity=36.1924686192469, Blast_Score=281, Evalue=7e-76, Organism=Homo sapiens, GI25777732, Length=484, Percent_Identity=34.297520661157, Blast_Score=280, Evalue=2e-75, Organism=Homo sapiens, GI25777728, Length=416, Percent_Identity=38.9423076923077, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=35.0840336134454, Blast_Score=264, Evalue=2e-70, Organism=Homo sapiens, GI25952152, Length=473, Percent_Identity=33.1923890063425, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI310128093, Length=473, Percent_Identity=31.2896405919662, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI188035924, Length=473, Percent_Identity=31.0782241014799, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI310128103, Length=473, Percent_Identity=31.0782241014799, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI11095441, Length=477, Percent_Identity=29.769392033543, Blast_Score=192, Evalue=9e-49, Organism=Homo sapiens, GI310128091, Length=473, Percent_Identity=30.0211416490486, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI301500698, Length=270, Percent_Identity=38.5185185185185, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI223972651, Length=464, Percent_Identity=28.2327586206897, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI310128089, Length=323, Percent_Identity=33.4365325077399, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=37.6, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI206597441, Length=447, Percent_Identity=30.4250559284116, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI206597439, Length=447, Percent_Identity=30.4250559284116, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI22907049, Length=447, Percent_Identity=30.4250559284116, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI73695881, Length=340, Percent_Identity=32.3529411764706, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI73695879, Length=340, Percent_Identity=32.3529411764706, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI310128095, Length=304, Percent_Identity=33.5526315789474, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI73466520, Length=358, Percent_Identity=28.4916201117318, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI4557303, Length=358, Percent_Identity=28.4916201117318, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI4502043, Length=431, Percent_Identity=29.0023201856148, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI238814371, Length=431, Percent_Identity=29.0023201856148, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI71773324, Length=336, Percent_Identity=31.25, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI238859541, Length=458, Percent_Identity=27.7292576419214, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI25777736, Length=458, Percent_Identity=27.7292576419214, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI25777734, Length=458, Percent_Identity=27.7292576419214, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI223972653, Length=464, Percent_Identity=25.6465517241379, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI310128087, Length=299, Percent_Identity=28.7625418060201, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI310128099, Length=250, Percent_Identity=27.2, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI310128101, Length=250, Percent_Identity=27.2, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1789015, Length=480, Percent_Identity=62.9166666666667, Blast_Score=636, Evalue=0.0, Organism=Escherichia coli, GI1787684, Length=474, Percent_Identity=37.5527426160338, Blast_Score=325, Evalue=5e-90, Organism=Escherichia coli, GI87081896, Length=494, Percent_Identity=34.6153846153846, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787715, Length=473, Percent_Identity=37.2093023255814, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1787558, Length=480, Percent_Identity=35.4166666666667, Blast_Score=278, Evalue=6e-76, Organism=Escherichia coli, GI1786504, Length=478, Percent_Identity=36.1924686192469, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI87081926, Length=447, Percent_Identity=35.1230425055928, Blast_Score=254, Evalue=8e-69, Organism=Escherichia coli, GI87082295, Length=487, Percent_Identity=35.9342915811088, Blast_Score=251, Evalue=6e-68, Organism=Escherichia coli, GI1788042, Length=469, Percent_Identity=30.7036247334755, Blast_Score=185, Evalue=6e-48, Organism=Escherichia coli, GI1787250, Length=451, Percent_Identity=28.8248337028825, Blast_Score=152, Evalue=7e-38, Organism=Escherichia coli, GI1787653, Length=386, Percent_Identity=26.4248704663212, Blast_Score=86, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17534119, Length=468, Percent_Identity=48.7179487179487, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI133930964, Length=477, Percent_Identity=37.7358490566038, Blast_Score=305, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17562198, Length=478, Percent_Identity=36.6108786610879, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI25144435, Length=473, Percent_Identity=35.7293868921776, Blast_Score=280, Evalue=9e-76, Organism=Caenorhabditis elegans, GI25143876, Length=484, Percent_Identity=34.7107438016529, Blast_Score=274, Evalue=8e-74, Organism=Caenorhabditis elegans, GI25143874, Length=484, Percent_Identity=34.7107438016529, Blast_Score=274, Evalue=1e-73, Organism=Caenorhabditis elegans, GI71995606, Length=463, Percent_Identity=37.5809935205184, Blast_Score=268, Evalue=3e-72, Organism=Caenorhabditis elegans, GI32564736, Length=415, Percent_Identity=37.1084337349398, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI71995613, Length=420, Percent_Identity=36.9047619047619, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI17551164, Length=460, Percent_Identity=33.0434782608696, Blast_Score=237, Evalue=9e-63, Organism=Caenorhabditis elegans, GI115534176, Length=477, Percent_Identity=32.7044025157233, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71986308, Length=436, Percent_Identity=31.8807339449541, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI32566756, Length=438, Percent_Identity=29.2237442922374, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI25146394, Length=438, Percent_Identity=29.2237442922374, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI25146391, Length=438, Percent_Identity=29.2237442922374, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17564084, Length=444, Percent_Identity=29.7297297297297, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17534447, Length=443, Percent_Identity=28.6681715575621, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI32564151, Length=398, Percent_Identity=29.1457286432161, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI115532534, Length=350, Percent_Identity=29.7142857142857, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71990744, Length=282, Percent_Identity=28.3687943262411, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319478, Length=484, Percent_Identity=47.5206611570248, Blast_Score=470, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6320917, Length=465, Percent_Identity=37.2043010752688, Blast_Score=309, Evalue=7e-85, Organism=Saccharomyces cerevisiae, GI6324950, Length=466, Percent_Identity=35.4077253218884, Blast_Score=288, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6325196, Length=468, Percent_Identity=33.7606837606838, Blast_Score=270, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6323821, Length=479, Percent_Identity=34.8643006263048, Blast_Score=266, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6323822, Length=478, Percent_Identity=35.1464435146443, Blast_Score=264, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6321828, Length=477, Percent_Identity=26.8343815513627, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6321826, Length=484, Percent_Identity=27.2727272727273, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323757, Length=325, Percent_Identity=25.2307692307692, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI281362580, Length=494, Percent_Identity=54.6558704453441, Blast_Score=557, Evalue=1e-159, Organism=Drosophila melanogaster, GI62472918, Length=494, Percent_Identity=54.6558704453441, Blast_Score=557, Evalue=1e-159, Organism=Drosophila melanogaster, GI62472926, Length=494, Percent_Identity=54.6558704453441, Blast_Score=557, Evalue=1e-159, Organism=Drosophila melanogaster, GI62472936, Length=494, Percent_Identity=54.6558704453441, Blast_Score=557, Evalue=1e-159, Organism=Drosophila melanogaster, GI21356737, Length=494, Percent_Identity=54.6558704453441, Blast_Score=557, Evalue=1e-159, Organism=Drosophila melanogaster, GI24650465, Length=474, Percent_Identity=39.662447257384, Blast_Score=330, Evalue=2e-90, Organism=Drosophila melanogaster, GI20129399, Length=476, Percent_Identity=34.453781512605, Blast_Score=281, Evalue=8e-76, Organism=Drosophila melanogaster, GI24585660, Length=476, Percent_Identity=34.453781512605, Blast_Score=278, Evalue=4e-75, Organism=Drosophila melanogaster, GI24666674, Length=475, Percent_Identity=29.2631578947368, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24638878, Length=437, Percent_Identity=29.9771167048055, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24638876, Length=437, Percent_Identity=29.9771167048055, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI281360299, Length=349, Percent_Identity=31.2320916905444, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI281360297, Length=349, Percent_Identity=31.2320916905444, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI281360295, Length=349, Percent_Identity=31.2320916905444, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24586250, Length=349, Percent_Identity=31.2320916905444, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI281360301, Length=349, Percent_Identity=31.2320916905444, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI45552499, Length=348, Percent_Identity=31.3218390804598, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI281360303, Length=349, Percent_Identity=30.6590257879656, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24668425, Length=448, Percent_Identity=26.1160714285714, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24668417, Length=448, Percent_Identity=26.1160714285714, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24668413, Length=448, Percent_Identity=26.1160714285714, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI28571806, Length=441, Percent_Identity=24.2630385487528, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571802, Length=441, Percent_Identity=24.2630385487528, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571800, Length=441, Percent_Identity=24.2630385487528, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571798, Length=441, Percent_Identity=24.2630385487528, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571796, Length=441, Percent_Identity=24.2630385487528, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28571794, Length=441, Percent_Identity=24.2630385487528, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28574525, Length=438, Percent_Identity=23.0593607305936, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI281360293, Length=151, Percent_Identity=33.7748344370861, Blast_Score=73, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016160 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR010102 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.79 [H]
Molecular weight: Translated: 52434; Mature: 52303
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEGTTRIAALDIVREAGLLKDKAYIDGAWVGADDGGDFPVLDPATGREIGRVPNMGAAE CCCCCHHHHHHHHHHHHCCCCCCCEECEEEECCCCCCCCCCCCCCCCCHHCCCCCCCHHH TRRAIDAAAAAWPAWRARTAKDRAAVLRRWYGLIMDNQEALAVLMTAEQGKPLGEARGEI HHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHCCCH AYGASFVEWFAEEGKRLYGEVVPAHGTDKRILTLREPIGVVAAITPWNFPSAMITRKVAP HHHHHHHHHHHHHCCEEEHEEECCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHH ALAAGCPVVLKPAEDTPLSALALVELAERAGLPKGLINVVTTHEAKAVGGEMTANPIVRK HHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHH LSFTGSTEVGKILMAQCAGTVKKVSLELGGNAPFIVFDDADLEAAVAGAIASKYRNAGQT EECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCE CVCANRLYVQEGIYEAFTEKLKAKVEAMRVGPALEGDVQQGPLINKKGLDKVDGLVRDAL EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH DKGATAVLGGKVHALGGTFYEPTILTGVTAAMRMATEEIFGPVAPLYRFSTEAEAIALAN HCCCEEEECCEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEC ATRFGLAAYFYTRDIGRVWRVAEGLEYGIVGINEGIISTESAPFGGVKESGIGREGSRHG CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCC IDDFVEIKYLCMGGI CHHHHHHHHHHCCCC >Mature Secondary Structure PEGTTRIAALDIVREAGLLKDKAYIDGAWVGADDGGDFPVLDPATGREIGRVPNMGAAE CCCCHHHHHHHHHHHHCCCCCCCEECEEEECCCCCCCCCCCCCCCCCHHCCCCCCCHHH TRRAIDAAAAAWPAWRARTAKDRAAVLRRWYGLIMDNQEALAVLMTAEQGKPLGEARGEI HHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHCCCH AYGASFVEWFAEEGKRLYGEVVPAHGTDKRILTLREPIGVVAAITPWNFPSAMITRKVAP HHHHHHHHHHHHHCCEEEHEEECCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHH ALAAGCPVVLKPAEDTPLSALALVELAERAGLPKGLINVVTTHEAKAVGGEMTANPIVRK HHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCCCHHHHH LSFTGSTEVGKILMAQCAGTVKKVSLELGGNAPFIVFDDADLEAAVAGAIASKYRNAGQT EECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCE CVCANRLYVQEGIYEAFTEKLKAKVEAMRVGPALEGDVQQGPLINKKGLDKVDGLVRDAL EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH DKGATAVLGGKVHALGGTFYEPTILTGVTAAMRMATEEIFGPVAPLYRFSTEAEAIALAN HCCCEEEECCEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEC ATRFGLAAYFYTRDIGRVWRVAEGLEYGIVGINEGIISTESAPFGGVKESGIGREGSRHG CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCC IDDFVEIKYLCMGGI CHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8297211; 9205837; 9278503 [H]