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The map label for this gene is ycjP [C]

Identifier: 83591434

GI number: 83591434

Start: 108062

End: 109000

Strand: Direct

Name: ycjP [C]

Synonym: Rru_A0094

Alternate gene names: 83591434

Gene position: 108062-109000 (Clockwise)

Preceding gene: 83591433

Following gene: 83591435

Centisome position: 2.48

GC content: 63.15

Gene sequence:

>939_bases
ATGAGGGATGGCAGTATCAGGGACGCCGGGCCGCCCTTGCCCGCACCGCCGCCACCGCGCGCCGCGCCGATCGCCGGCCA
AAGCGCCGGGGGGCGTCTCGCGCTGCGCATCGGTCTTTACGCGGTTCTGGTGCTGTTTGCGCTTTATTACCTTTTGCCGC
TGTTCGTCATGCTGCTGACCTCGGTCAAAACGCTTGACGATATCCGCGCCGGGTCGCTGATCGCCCTGCCGCGAACCCTG
ACGTTTGAACCCTGGCTGAAGGCCTGGGACTCGGCCTGCGTTGGCGTGCAATGCGCTGGGCTCAAGCCCTATTTCCTCAA
TTCCCTGCTGCTGGTGGTGCCGGCGGTGGCGATCTCGACGGTTTTGGGGGCGCTCAACGGCTATGCCCTGACCAAATGGC
GCTTCCCCGGCTCGCAGCTGATCTTCGCCCTGATGCTGTTTGGCTGTTTCATTCCCTTTCAGGTGGTGCTGTTGCCGATG
GCCAGGGTGCTGGGACTGGCCGGGCTGGCCGGCAGCATCCAAGGGCTGATCCTGGTGCATGTGGTCTATGGGCTGTCGTT
CACCACGCTGTTCTTCCGCAATTTCTATATGACCGTCCCCGACGAGCTGGTGCGGGCGGCGACCATCGACGGCGCCGGCT
TCTTCCGCATCTTTTTTTCGATCCTGCTGCCGATGTCGCCGCCGATCATCGTCGTCACCATCATCTGGCAGTTCACCCAG
ATCTATAACGACTTCCTGTTTGGCGTGTCCTTCACGGTCAGCGGCGGGCAGCCGGTCACGGTGGCGCTCAATAATCTGGT
CGCCAGTTCGACGGGGGTGAAGGAATACAACGTCGATATGGCCGCCGCCATCCTCACCGCCCTGCCGACCCTGGTGGTCT
ATGCGGTGGCGGGCAAGTATTTCATCCGCGGGCTTTCGGCCGGCGCGGTCAAGGGGTAG

Upstream 100 bases:

>100_bases
GCCAGCTTGGCACGGCGGCGGCCAGCGCGGTGATGATGCTGATGACGGTGATGGCCATCATCGTGCCCTATCTCTATTCC
GAATTGCGGGAGCGCCGGTC

Downstream 100 bases:

>100_bases
CGGGCGATGGCATCACTCGGCATTCGCGGCATCACCAAGCGCTTTGGCGCCACCGAGGTGCTCAAGGGCATCGATCTTGA
TCTCGACGACGGCGAATTCC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRDGSIRDAGPPLPAPPPPRAAPIAGQSAGGRLALRIGLYAVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTL
TFEPWLKAWDSACVGVQCAGLKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVLLPM
ARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRIFFSILLPMSPPIIVVTIIWQFTQ
IYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKEYNVDMAAAILTALPTLVVYAVAGKYFIRGLSAGAVKG

Sequences:

>Translated_312_residues
MRDGSIRDAGPPLPAPPPPRAAPIAGQSAGGRLALRIGLYAVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTL
TFEPWLKAWDSACVGVQCAGLKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVLLPM
ARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRIFFSILLPMSPPIIVVTIIWQFTQ
IYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKEYNVDMAAAILTALPTLVVYAVAGKYFIRGLSAGAVKG
>Mature_312_residues
MRDGSIRDAGPPLPAPPPPRAAPIAGQSAGGRLALRIGLYAVLVLFALYYLLPLFVMLLTSVKTLDDIRAGSLIALPRTL
TFEPWLKAWDSACVGVQCAGLKPYFLNSLLLVVPAVAISTVLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVLLPM
ARVLGLAGLAGSIQGLILVHVVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRIFFSILLPMSPPIIVVTIIWQFTQ
IYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKEYNVDMAAAILTALPTLVVYAVAGKYFIRGLSAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=289, Percent_Identity=30.1038062283737, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789860, Length=276, Percent_Identity=28.2608695652174, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33411; Mature: 33411

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDGSIRDAGPPLPAPPPPRAAPIAGQSAGGRLALRIGLYAVLVLFALYYLLPLFVMLLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVGVQCAGLKPYFLNSLLLVVPAVAIST
HHHHHHHHCCCCEEECCCCCCCCHHHHHHCCHHCCEEECCCCHHHHHHHHHHHHHHHHHH
VLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVLLPMARVLGLAGLAGSIQGLILVH
HHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRIFFSILLPMSPPIIVVTIIWQFTQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKEYNVDMAAAILTALPTLVVYAVAGKY
HHHHHHHHHEEEECCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FIRGLSAGAVKG
HHHHCCCCCCCC
>Mature Secondary Structure
MRDGSIRDAGPPLPAPPPPRAAPIAGQSAGGRLALRIGLYAVLVLFALYYLLPLFVMLLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVKTLDDIRAGSLIALPRTLTFEPWLKAWDSACVGVQCAGLKPYFLNSLLLVVPAVAIST
HHHHHHHHCCCCEEECCCCCCCCHHHHHHCCHHCCEEECCCCHHHHHHHHHHHHHHHHHH
VLGALNGYALTKWRFPGSQLIFALMLFGCFIPFQVVLLPMARVLGLAGLAGSIQGLILVH
HHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVYGLSFTTLFFRNFYMTVPDELVRAATIDGAGFFRIFFSILLPMSPPIIVVTIIWQFTQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IYNDFLFGVSFTVSGGQPVTVALNNLVASSTGVKEYNVDMAAAILTALPTLVVYAVAGKY
HHHHHHHHHEEEECCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FIRGLSAGAVKG
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]