Click here to switch to the map view.

The map label for this gene is ytfP [H]

Identifier: 83591427

GI number: 83591427

Start: 100089

End: 101330

Strand: Direct

Name: ytfP [H]

Synonym: Rru_A0087

Alternate gene names: 83591427

Gene position: 100089-101330 (Clockwise)

Preceding gene: 83591426

Following gene: 83591428

Centisome position: 2.3

GC content: 72.95

Gene sequence:

>1242_bases
ATGGCGGAGCGCGGAACGGCCGAGGGGCGCGTCGCCGTGATCGGCGGCGGCCCGGCCGGGCTGATGGCCGCCGAACGGAT
CGCCGAGGCCGGCTTTGGCGTCGATGTCTTCGATGCCATGCCGAGCTTGGGCCGCAAGCTGTTGATGGCCGGGCGCGGTG
GGCTCAACATCACCCATTCCGAACCGCTCGAGCGGTTTCTGGAGCGCTACGGCGCGGGTCGGCCGCGGCTGGAGCCGATG
ATCCGGGCCTTTTCCCCCGAAGCCCTGCGCGGCTGGCTGGCCGATCTTGGTCAGCCGACCGTGGTCGGCAGTTCGGGCCG
GGTCTTTCCCCAAGCCTTCAAGGCCTCGCCGCTGTTGCGCGCCTGGCTGCGTCGGTTGGACGGGGCCGGGGTCGCCTTCC
ATCCCCGCCACCGCTGGCTGGGCTGGGACGCGGACGGCGCCCTGGCTTTCACCGGCCCCACCGGCCGGCAACGGATCCAA
GCCTCGGCCACCGTTCTCGCCTTGGGCGGGGCGAGTTGGCCGCGTCTGGGCTCGGATGGCGCCTGGGTCGGGGTGTTGGA
GGCCAAGGGGATCGCCGTCAGCGCCCTGCGTCCGGCCAATTGCGGCTTTGATATCGGCTGGTCGGCGGTGCTGGCCGATC
GCTTCGCCGGGGCGCCGCTCAAGCCGGTGGTGGCCACCTTCGCCGGCGAGCATCGGCGCGGCGAATGCGTGCTCACCCGC
ACCGGGGTCGAAGGCGGGCTGATCTATGCCTTCTCGGCGGCTTTGCGCGAGGCGATCGCCGGCGGCGGTGGGGCGACGCT
GATCCTTGATCTGATGCCCGATCATTCCCCGGCCGCCCTCGAGGCGGCCTTGGCCCGGCCGCGTGGGGGGCGGTCGCTGG
CCACCCATCTCAAGCGCTGCGGCGTCGGTGCGGTTCAGGCCGCCTTGCTGCGCGAGGGGGCGGGGCCGGCGGATCTGGCC
GATCCGGCGGCGATCGCCCGCCGTTTGAAAGCCCTGCCGCTGCGTTTGATCGCGCCCCGGCCGCTGGCCGAGGCGATCAG
CACCGCCGGCGGCGTCGCCTTCGCCGAACTGAGCCCGTCGTTGATGCTGCGCGCCCTGCCCGGCGTGTTCTGCTGCGGGG
AAATGCTCGACTGGGAGGCGCCGACCGGGGGATACCTGTTGACGGCCTGCCTTGCCACCGGCCGGGCGGCCGGCCAGGGG
GTGGCGCGGTATCTCGCGGCTGATCGGGTCCCGGCCGCATAA

Upstream 100 bases:

>100_bases
GCGGTGTCGGGCGGTCCGGCCTCCTTCGCCCCCAAGGATCGCTCGCGCTTCCTCCAAGCCCTGGAAGAGGCGATCCAGGC
CGTCAAGCGGGGACGCTGAG

Downstream 100 bases:

>100_bases
ACGCCTGCCCCACCCTTGGTCGGCGGGACCGGCGGCCCCAGGTTAGAGCGGTGTGCGGGAGACATGGTCCCCGTACACCG
CTCTAACCCACTGATAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAERGTAEGRVAVIGGGPAGLMAAERIAEAGFGVDVFDAMPSLGRKLLMAGRGGLNITHSEPLERFLERYGAGRPRLEPM
IRAFSPEALRGWLADLGQPTVVGSSGRVFPQAFKASPLLRAWLRRLDGAGVAFHPRHRWLGWDADGALAFTGPTGRQRIQ
ASATVLALGGASWPRLGSDGAWVGVLEAKGIAVSALRPANCGFDIGWSAVLADRFAGAPLKPVVATFAGEHRRGECVLTR
TGVEGGLIYAFSAALREAIAGGGGATLILDLMPDHSPAALEAALARPRGGRSLATHLKRCGVGAVQAALLREGAGPADLA
DPAAIARRLKALPLRLIAPRPLAEAISTAGGVAFAELSPSLMLRALPGVFCCGEMLDWEAPTGGYLLTACLATGRAAGQG
VARYLAADRVPAA

Sequences:

>Translated_413_residues
MAERGTAEGRVAVIGGGPAGLMAAERIAEAGFGVDVFDAMPSLGRKLLMAGRGGLNITHSEPLERFLERYGAGRPRLEPM
IRAFSPEALRGWLADLGQPTVVGSSGRVFPQAFKASPLLRAWLRRLDGAGVAFHPRHRWLGWDADGALAFTGPTGRQRIQ
ASATVLALGGASWPRLGSDGAWVGVLEAKGIAVSALRPANCGFDIGWSAVLADRFAGAPLKPVVATFAGEHRRGECVLTR
TGVEGGLIYAFSAALREAIAGGGGATLILDLMPDHSPAALEAALARPRGGRSLATHLKRCGVGAVQAALLREGAGPADLA
DPAAIARRLKALPLRLIAPRPLAEAISTAGGVAFAELSPSLMLRALPGVFCCGEMLDWEAPTGGYLLTACLATGRAAGQG
VARYLAADRVPAA
>Mature_412_residues
AERGTAEGRVAVIGGGPAGLMAAERIAEAGFGVDVFDAMPSLGRKLLMAGRGGLNITHSEPLERFLERYGAGRPRLEPMI
RAFSPEALRGWLADLGQPTVVGSSGRVFPQAFKASPLLRAWLRRLDGAGVAFHPRHRWLGWDADGALAFTGPTGRQRIQA
SATVLALGGASWPRLGSDGAWVGVLEAKGIAVSALRPANCGFDIGWSAVLADRFAGAPLKPVVATFAGEHRRGECVLTRT
GVEGGLIYAFSAALREAIAGGGGATLILDLMPDHSPAALEAALARPRGGRSLATHLKRCGVGAVQAALLREGAGPADLAD
PAAIARRLKALPLRLIAPRPLAEAISTAGGVAFAELSPSLMLRALPGVFCCGEMLDWEAPTGGYLLTACLATGRAAGQGV
ARYLAADRVPAA

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 42674; Mature: 42543

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERGTAEGRVAVIGGGPAGLMAAERIAEAGFGVDVFDAMPSLGRKLLMAGRGGLNITHS
CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
EPLERFLERYGAGRPRLEPMIRAFSPEALRGWLADLGQPTVVGSSGRVFPQAFKASPLLR
HHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCHHHH
AWLRRLDGAGVAFHPRHRWLGWDADGALAFTGPTGRQRIQASATVLALGGASWPRLGSDG
HHHHHCCCCCCEECCCCCCCCCCCCCCEEEECCCCCHHHHHCEEEEEECCCCCCCCCCCC
AWVGVLEAKGIAVSALRPANCGFDIGWSAVLADRFAGAPLKPVVATFAGEHRRGECVLTR
CEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEE
TGVEGGLIYAFSAALREAIAGGGGATLILDLMPDHSPAALEAALARPRGGRSLATHLKRC
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHC
GVGAVQAALLREGAGPADLADPAAIARRLKALPLRLIAPRPLAEAISTAGGVAFAELSPS
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEECCCHH
LMLRALPGVFCCGEMLDWEAPTGGYLLTACLATGRAAGQGVARYLAADRVPAA
HHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AERGTAEGRVAVIGGGPAGLMAAERIAEAGFGVDVFDAMPSLGRKLLMAGRGGLNITHS
CCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
EPLERFLERYGAGRPRLEPMIRAFSPEALRGWLADLGQPTVVGSSGRVFPQAFKASPLLR
HHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCHHHH
AWLRRLDGAGVAFHPRHRWLGWDADGALAFTGPTGRQRIQASATVLALGGASWPRLGSDG
HHHHHCCCCCCEECCCCCCCCCCCCCCEEEECCCCCHHHHHCEEEEEECCCCCCCCCCCC
AWVGVLEAKGIAVSALRPANCGFDIGWSAVLADRFAGAPLKPVVATFAGEHRRGECVLTR
CEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEE
TGVEGGLIYAFSAALREAIAGGGGATLILDLMPDHSPAALEAALARPRGGRSLATHLKRC
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHC
GVGAVQAALLREGAGPADLADPAAIARRLKALPLRLIAPRPLAEAISTAGGVAFAELSPS
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEECCCHH
LMLRALPGVFCCGEMLDWEAPTGGYLLTACLATGRAAGQGVARYLAADRVPAA
HHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]