| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is ybbK [H]
Identifier: 83591386
GI number: 83591386
Start: 48174
End: 48683
Strand: Direct
Name: ybbK [H]
Synonym: Rru_A0046
Alternate gene names: 83591386
Gene position: 48174-48683 (Clockwise)
Preceding gene: 83591385
Following gene: 83591394
Centisome position: 1.11
GC content: 68.43
Gene sequence:
>510_bases TTGGCTCCGCTACCGGTAACCCCCCGTATCCTCGTCAGCGGTTGTCTGCTGGGCGAGCCCATCCGTTATAACGCGACCGC CAAGCCGGTCCTTCACCCACTGCTGGAAACATGGCGGGCCGAAGGGCGGCTGGTGCCGCTTTGCCCGGAAATCCTGGCCG GCTTTTCGACCCCGCGGCCACCGGCCGAGATCGCCGAAGCGCGAACCGGCGAGGATGTGCTTGATGGCTTCGGCCGGGTT TGTGACAACCGGGGCATCGACATCACCGATCAATACCTGCTGGGCGCCCGCCGCGCCGCCGATCTGGCCCGCGAGCAGGG CTGCCGCTTCGCCTTGCTCAGCAACCGCAGCCCGTCTTGCGGGGTGCGGCTGATCTATGACGGATCGTTCGCCGGCACCT TGCACGAGGGCCGCGGCGTCACCGCCGCCCTGCTGCGCCGCGAAGGGCTGGCGGTCTTCACCGAAGACGAGGTCGCCGAT CTCGCCCTCGCCCTGACCACAGCCTGGTAG
Upstream 100 bases:
>100_bases CAGGTCACGGTTGACGCGGGGATTTCCAACAGCTTCGCCTTCGGTGGCCTGAACGCGGTGCTGGCCCTGCGGCGGTTCGT CGGCTGACGGAGATCGGTTC
Downstream 100 bases:
>100_bases GGGGCGGTCGGCGCGGCGATAGCGCGGAAAAGGCGACACCGGCTTTCCGCCCCATCCCCGCTCTAAACGTTTGAGAGGGG AGCAAATCATCGTCGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAPLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRPPAEIAEARTGEDVLDGFGRV CDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSCGVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVAD LALALTTAW
Sequences:
>Translated_169_residues MAPLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRPPAEIAEARTGEDVLDGFGRV CDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSCGVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVAD LALALTTAW >Mature_168_residues APLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRPPAEIAEARTGEDVLDGFGRVC DNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSCGVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVADL ALALTTAW
Specific function: Unknown
COG id: COG1683
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007553 [H]
Pfam domain/function: PF04463 DUF523 [H]
EC number: NA
Molecular weight: Translated: 18209; Mature: 18078
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRP CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCC PAEIAEARTGEDVLDGFGRVCDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSC HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC GVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVADLALALTTAW CEEEEECCCCCCEEECCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCC >Mature Secondary Structure APLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRP CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCC PAEIAEARTGEDVLDGFGRVCDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSC HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC GVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVADLALALTTAW CEEEEECCCCCCEEECCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]