Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is ybbK [H]

Identifier: 83591386

GI number: 83591386

Start: 48174

End: 48683

Strand: Direct

Name: ybbK [H]

Synonym: Rru_A0046

Alternate gene names: 83591386

Gene position: 48174-48683 (Clockwise)

Preceding gene: 83591385

Following gene: 83591394

Centisome position: 1.11

GC content: 68.43

Gene sequence:

>510_bases
TTGGCTCCGCTACCGGTAACCCCCCGTATCCTCGTCAGCGGTTGTCTGCTGGGCGAGCCCATCCGTTATAACGCGACCGC
CAAGCCGGTCCTTCACCCACTGCTGGAAACATGGCGGGCCGAAGGGCGGCTGGTGCCGCTTTGCCCGGAAATCCTGGCCG
GCTTTTCGACCCCGCGGCCACCGGCCGAGATCGCCGAAGCGCGAACCGGCGAGGATGTGCTTGATGGCTTCGGCCGGGTT
TGTGACAACCGGGGCATCGACATCACCGATCAATACCTGCTGGGCGCCCGCCGCGCCGCCGATCTGGCCCGCGAGCAGGG
CTGCCGCTTCGCCTTGCTCAGCAACCGCAGCCCGTCTTGCGGGGTGCGGCTGATCTATGACGGATCGTTCGCCGGCACCT
TGCACGAGGGCCGCGGCGTCACCGCCGCCCTGCTGCGCCGCGAAGGGCTGGCGGTCTTCACCGAAGACGAGGTCGCCGAT
CTCGCCCTCGCCCTGACCACAGCCTGGTAG

Upstream 100 bases:

>100_bases
CAGGTCACGGTTGACGCGGGGATTTCCAACAGCTTCGCCTTCGGTGGCCTGAACGCGGTGCTGGCCCTGCGGCGGTTCGT
CGGCTGACGGAGATCGGTTC

Downstream 100 bases:

>100_bases
GGGGCGGTCGGCGCGGCGATAGCGCGGAAAAGGCGACACCGGCTTTCCGCCCCATCCCCGCTCTAAACGTTTGAGAGGGG
AGCAAATCATCGTCGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MAPLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRPPAEIAEARTGEDVLDGFGRV
CDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSCGVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVAD
LALALTTAW

Sequences:

>Translated_169_residues
MAPLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRPPAEIAEARTGEDVLDGFGRV
CDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSCGVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVAD
LALALTTAW
>Mature_168_residues
APLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRPPAEIAEARTGEDVLDGFGRVC
DNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSCGVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVADL
ALALTTAW

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007553 [H]

Pfam domain/function: PF04463 DUF523 [H]

EC number: NA

Molecular weight: Translated: 18209; Mature: 18078

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRP
CCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCC
PAEIAEARTGEDVLDGFGRVCDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSC
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
GVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVADLALALTTAW
CEEEEECCCCCCEEECCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure 
APLPVTPRILVSGCLLGEPIRYNATAKPVLHPLLETWRAEGRLVPLCPEILAGFSTPRP
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCC
PAEIAEARTGEDVLDGFGRVCDNRGIDITDQYLLGARRAADLAREQGCRFALLSNRSPSC
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
GVRLIYDGSFAGTLHEGRGVTAALLRREGLAVFTEDEVADLALALTTAW
CEEEEECCCCCCEEECCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]