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The map label for this gene is rpmD

Identifier: 83591258

GI number: 83591258

Start: 2558321

End: 2558503

Strand: Reverse

Name: rpmD

Synonym: Moth_2442

Alternate gene names: 83591258

Gene position: 2558503-2558321 (Counterclockwise)

Preceding gene: 83591259

Following gene: 83591257

Centisome position: 97.33

GC content: 57.92

Gene sequence:

>183_bases
GTGGCAAATTTAAGGATAACCCTTGTCAAGAGCCTCATTGGCCGGCCGGAGACCGAGAGGAAAACGGCCCGGGCCATGGG
ATTGAAGAAACTCCACCGGCAGGTAGTTTGCCCGGATACGCCGGTAACCAGGGGGCAGGTCCAGAAACTGGCCCACCTGG
TCCGGGTTGAATCCATCGAATAG

Upstream 100 bases:

>100_bases
TGCCACTATCGAGGGTTTGAAGGGTCTGAAGCGAGCGGAAGAAGTGGCCCGCCTCCGGGGTAAAACGGTTGCCGAGCTTA
TCGGCTAGGAGGAATAGGCA

Downstream 100 bases:

>100_bases
GAGGTGATTATGGTGCGTCTCCACGAATTACATCCAGCTCCCGGTTCCCGTCCCCGCGCCACCCGGGTAGGCCGGGGTAT
AGGCTCCGGCCTGGGCAAGA

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MANLRITLVKSLIGRPETERKTARAMGLKKLHRQVVCPDTPVTRGQVQKLAHLVRVESIE

Sequences:

>Translated_60_residues
MANLRITLVKSLIGRPETERKTARAMGLKKLHRQVVCPDTPVTRGQVQKLAHLVRVESIE
>Mature_59_residues
ANLRITLVKSLIGRPETERKTARAMGLKKLHRQVVCPDTPVTRGQVQKLAHLVRVESIE

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_MOOTA (Q2RFR5)

Other databases:

- EMBL:   CP000232
- RefSeq:   YP_431267.1
- ProteinModelPortal:   Q2RFR5
- SMR:   Q2RFR5
- STRING:   Q2RFR5
- GeneID:   3831672
- GenomeReviews:   CP000232_GR
- KEGG:   mta:Moth_2442
- NMPDR:   fig|264732.9.peg.2474
- eggNOG:   COG1841
- HOGENOM:   HBG690556
- OMA:   MANLRIT
- BioCyc:   MTHE264732:MOTH_2442-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01371_B
- InterPro:   IPR005996
- InterPro:   IPR016082
- Gene3D:   G3DSA:3.30.1390.20
- PIRSF:   PIRSF002211
- TIGRFAMs:   TIGR01308

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 6774; Mature: 6643

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLRITLVKSLIGRPETERKTARAMGLKKLHRQVVCPDTPVTRGQVQKLAHLVRVESIE
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANLRITLVKSLIGRPETERKTARAMGLKKLHRQVVCPDTPVTRGQVQKLAHLVRVESIE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA