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The map label for this gene is secY

Identifier: 83591256

GI number: 83591256

Start: 2556605

End: 2557867

Strand: Reverse

Name: secY

Synonym: Moth_2440

Alternate gene names: 83591256

Gene position: 2557867-2556605 (Counterclockwise)

Preceding gene: 83591257

Following gene: 83591255

Centisome position: 97.3

GC content: 51.94

Gene sequence:

>1263_bases
GTGCTAGACACCCTGGCCAGCGCCTGGAAACTGGAAGACCTGCGGAAGAAGATTTTTTTCACTTTGCTCATGTTTGTAGT
CTTTCGCCTGGGTGCCCATGTTCCGGTACCGGGTATCAACAATGCCATTTTAAAGGAATTGATTGGTACCGGGACGATCT
TCGGGTTTTTTGACGTAATTTCCGGCGGGGCTTTTAAGCGCTTTACCATCTTTGCCATGGGCATTATGCCCTACATCAAT
GCCTCGATTATCATGCAGCTCCTGACAGTGGTCATCCCGGCCCTGGAGCGCCTGGCCAAGGAGGATATTGAGGGCCGAAA
AAAAATCGTCCAGTATACACGCTACGGGACAGTTATTTTAAGTATACTCCAGGCCCTGGGCATGGGCCTGTACCTGGCTC
GCTCCCATGCCTTCCTGCGGCCGGGCCTTTATAACTACCTGGTGGTAGTTATAATGCTTACAGCGGGAACGACTTTTCTT
ATGTGGATGGGCGAACAGATTACCGAAAAGGGTATCGGCAATGGCATCTCCCTGATCATCTTTGCCGGTATAGTATCGCG
CCTGCCGGCAGGGGCGGCCAGCCTCTACCAGTACGTTACCTCAGGAACGGTCAATATTATTTCCCTGCTTGTCTTTGCCA
TTGTGGCTGTGCTTATTATAGCTGCCGTGGTGGCAGTACAGGAAGGGGAACGCCGGATTGCCGTCCAGTATGCCAAACGG
GTGGTGGGCCGGCGTGTCTATGGTGGCCAGAGCACCCATATACCCCTGAAAGTCAATCAGGCAGGGGTTATTCCCGTAAT
CTTTGCCATGTCCATCCTGCTCTTTCCCAGTACCCTGGCGTCCTGGTTTCCCCAGAGCAGTTTGGCCCAGACAATAGTCC
GGTTCTTCGATCCCCGGTCGGCTTTCTATATGATCCTGTATGCCCTGTTAATTATCTTCTTTACCTATTTTTATACGGCT
GTGACCTTTAACCCCCAGGACGTGGCCGATAATATGAAGAAATATGGTGGTTTTATACCGGGCTTAAGACCAGGGCGTCC
TACGGCCGAGTATATTGAACGGATCCTGGCCCGGGTAACCCTGGCCGGGGCTATTTTCCTGGCGTTTATTGCCGTACTGC
CCAATCTTCTCATGGCTATCACCGGGATCAACGTCTATTTCGGCGGCACTTCCCTGCTGATTGTCGTGGGTGTGGCACTG
GAAACCATGAAACAACTGGAATCCCACCTGTTGTTGCGGCACTACCAGGGCTTTATGAAATAA

Upstream 100 bases:

>100_bases
CGGCGAACTGACCAAAAAGTTGACTGTCAAGGTTCAGGCGGCTAGCCGTAAAGCCATTGAAAAGATTGAGGCTGCCGGCG
GCAAAGTCGAGGTGATGTAG

Downstream 100 bases:

>100_bases
CAACCGGGAGGCTTAAAGGCATGCGCTTGGTATTACTTGGACCACCCGGCGCCGGGAAAGGGACCCAGGCCAGGGAGATT
AACCAGCGCCTGGCCATACC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MLDTLASAWKLEDLRKKIFFTLLMFVVFRLGAHVPVPGINNAILKELIGTGTIFGFFDVISGGAFKRFTIFAMGIMPYIN
ASIIMQLLTVVIPALERLAKEDIEGRKKIVQYTRYGTVILSILQALGMGLYLARSHAFLRPGLYNYLVVVIMLTAGTTFL
MWMGEQITEKGIGNGISLIIFAGIVSRLPAGAASLYQYVTSGTVNIISLLVFAIVAVLIIAAVVAVQEGERRIAVQYAKR
VVGRRVYGGQSTHIPLKVNQAGVIPVIFAMSILLFPSTLASWFPQSSLAQTIVRFFDPRSAFYMILYALLIIFFTYFYTA
VTFNPQDVADNMKKYGGFIPGLRPGRPTAEYIERILARVTLAGAIFLAFIAVLPNLLMAITGINVYFGGTSLLIVVGVAL
ETMKQLESHLLLRHYQGFMK

Sequences:

>Translated_420_residues
MLDTLASAWKLEDLRKKIFFTLLMFVVFRLGAHVPVPGINNAILKELIGTGTIFGFFDVISGGAFKRFTIFAMGIMPYIN
ASIIMQLLTVVIPALERLAKEDIEGRKKIVQYTRYGTVILSILQALGMGLYLARSHAFLRPGLYNYLVVVIMLTAGTTFL
MWMGEQITEKGIGNGISLIIFAGIVSRLPAGAASLYQYVTSGTVNIISLLVFAIVAVLIIAAVVAVQEGERRIAVQYAKR
VVGRRVYGGQSTHIPLKVNQAGVIPVIFAMSILLFPSTLASWFPQSSLAQTIVRFFDPRSAFYMILYALLIIFFTYFYTA
VTFNPQDVADNMKKYGGFIPGLRPGRPTAEYIERILARVTLAGAIFLAFIAVLPNLLMAITGINVYFGGTSLLIVVGVAL
ETMKQLESHLLLRHYQGFMK
>Mature_420_residues
MLDTLASAWKLEDLRKKIFFTLLMFVVFRLGAHVPVPGINNAILKELIGTGTIFGFFDVISGGAFKRFTIFAMGIMPYIN
ASIIMQLLTVVIPALERLAKEDIEGRKKIVQYTRYGTVILSILQALGMGLYLARSHAFLRPGLYNYLVVVIMLTAGTTFL
MWMGEQITEKGIGNGISLIIFAGIVSRLPAGAASLYQYVTSGTVNIISLLVFAIVAVLIIAAVVAVQEGERRIAVQYAKR
VVGRRVYGGQSTHIPLKVNQAGVIPVIFAMSILLFPSTLASWFPQSSLAQTIVRFFDPRSAFYMILYALLIIFFTYFYTA
VTFNPQDVADNMKKYGGFIPGLRPGRPTAEYIERILARVTLAGAIFLAFIAVLPNLLMAITGINVYFGGTSLLIVVGVAL
ETMKQLESHLLLRHYQGFMK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=428, Percent_Identity=47.6635514018692, Blast_Score=365, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46336; Mature: 46336

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]