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The map label for this gene is ybjY [C]

Identifier: 83591186

GI number: 83591186

Start: 2495504

End: 2496721

Strand: Reverse

Name: ybjY [C]

Synonym: Moth_2370

Alternate gene names: 83591186

Gene position: 2496721-2495504 (Counterclockwise)

Preceding gene: 83591187

Following gene: 83591185

Centisome position: 94.98

GC content: 64.78

Gene sequence:

>1218_bases
GTGAGGAAGAGGAGCTTTGCCGTTTTCACCCTGGCCTTTTTCCTCGCCGCCACGGCGGTAGGCGGCTGCGGTAAAAAGCC
GGCCGATCAGGAGGCGGCAGCGGCAAAGGTGGCGGTGGAAGTGGCCAGAGTTACCCGGGGCAATATCGCCCAGCCCGCCC
GGGTAACGGGGACGGTCCAGGCGGGGACAACGGTTAACGTCACCGCCGCCACGCCGGGCAAGCTGAAGTCCGTACTGGTA
CACGTCGGCGACAGGGTCAGCCGGGGCCAGATCATCGCCGAGCTGGAGGATGACGATGCCGCAGCCCGCCTGGCCCAGGC
CCAGGCCGGCTTAGACCAGGCCCGCACCGCCCCGGCCCAGGCCGAGGCCGGGATCAAGCAGGCCGAAGCCAGGCTGAAGC
AGGCCGAAGTCCAGGCTCAGCTAGATGAAGCCAATCTCCAGCGGACCCAGGCCCTTTTTGACTCGGGAGCCGCCTCCCAG
CAGCAACTGGACGCCGCCCGGACGGCTGCCGCAGCCAGCAAGGAAAACCTGGAAATACTTCGCGGCGCCCTGGAGGCCGC
CCGGGCCAGCCTGGCATCCTCCCAGGCCCAAATCGCCACGGCGGAGGCGGCCGTACGCCAGGCGCAAGTGGCCCTGGATA
ATTGTTACATAAAGGCTCCTGTTGACGGGGTAGTGGCCGCACGCCTCCTGGAACCCGGGGAGACGGCCCAGGGAGCGGTG
GTCACCCTGGTAACCACCGGCGACCTCCAGGTGGAGATCAACGTAACCGAGGAGGACATCAATTACCTCCAGGTAGGAAA
GAAGGTAAGCGTAGAAGTGCCGGCGGCGGGGAATAAAGCCCTGGAGGGCAGCGTCGCCAGCAGCAGCCCGGCTGCCGATA
AGAGCACGCGCCTGTACAGCGTTAAGGTGGCTATTCCTGACGCCCCGGCGGAAGTAAAACCGGGTATGGCCGCCACGGTG
GTCTTCCAGACCCGGGAGGTGCAGAATGCCCTTCTGGTGCCGAAAAATGCCGTGGTCAACCGCAGCGGCCAGAGCATCGT
CTACACGGTCGTCGACGGCAAGGCCATGGGCCAGGTGGTTACCACCGGCATCGACGACGGCCGGAATATCGAGATCTTGA
AGGGCCTGAACGAAGGAACGACCATTATCGTCAAGGGCCAGGACTTTGTCAATGAGAGCCAGCCGGTGCAAATAGTGAAT
GGGGGGCCGCAAGCATGA

Upstream 100 bases:

>100_bases
CATTTTAAATTAATAACATTGAACCCCTTGCCAGAAATATGGTAAGATGATTTCTGTTGACCGACCGTTCGGTCGATTTA
ATACGGGGGGAGTAGTAACC

Downstream 100 bases:

>100_bases
ACTGGTCCCAGGCAGTCATCAAACGCCCGGTAGCTTTAACTATGGTGGTCCTGGTGGTCATCCTCATGGGTGTGGTGTCC
CTGTCCCGCCTGAAGGTCGA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MRKRSFAVFTLAFFLAATAVGGCGKKPADQEAAAAKVAVEVARVTRGNIAQPARVTGTVQAGTTVNVTAATPGKLKSVLV
HVGDRVSRGQIIAELEDDDAAARLAQAQAGLDQARTAPAQAEAGIKQAEARLKQAEVQAQLDEANLQRTQALFDSGAASQ
QQLDAARTAAAASKENLEILRGALEAARASLASSQAQIATAEAAVRQAQVALDNCYIKAPVDGVVAARLLEPGETAQGAV
VTLVTTGDLQVEINVTEEDINYLQVGKKVSVEVPAAGNKALEGSVASSSPAADKSTRLYSVKVAIPDAPAEVKPGMAATV
VFQTREVQNALLVPKNAVVNRSGQSIVYTVVDGKAMGQVVTTGIDDGRNIEILKGLNEGTTIIVKGQDFVNESQPVQIVN
GGPQA

Sequences:

>Translated_405_residues
MRKRSFAVFTLAFFLAATAVGGCGKKPADQEAAAAKVAVEVARVTRGNIAQPARVTGTVQAGTTVNVTAATPGKLKSVLV
HVGDRVSRGQIIAELEDDDAAARLAQAQAGLDQARTAPAQAEAGIKQAEARLKQAEVQAQLDEANLQRTQALFDSGAASQ
QQLDAARTAAAASKENLEILRGALEAARASLASSQAQIATAEAAVRQAQVALDNCYIKAPVDGVVAARLLEPGETAQGAV
VTLVTTGDLQVEINVTEEDINYLQVGKKVSVEVPAAGNKALEGSVASSSPAADKSTRLYSVKVAIPDAPAEVKPGMAATV
VFQTREVQNALLVPKNAVVNRSGQSIVYTVVDGKAMGQVVTTGIDDGRNIEILKGLNEGTTIIVKGQDFVNESQPVQIVN
GGPQA
>Mature_405_residues
MRKRSFAVFTLAFFLAATAVGGCGKKPADQEAAAAKVAVEVARVTRGNIAQPARVTGTVQAGTTVNVTAATPGKLKSVLV
HVGDRVSRGQIIAELEDDDAAARLAQAQAGLDQARTAPAQAEAGIKQAEARLKQAEVQAQLDEANLQRTQALFDSGAASQ
QQLDAARTAAAASKENLEILRGALEAARASLASSQAQIATAEAAVRQAQVALDNCYIKAPVDGVVAARLLEPGETAQGAV
VTLVTTGDLQVEINVTEEDINYLQVGKKVSVEVPAAGNKALEGSVASSSPAADKSTRLYSVKVAIPDAPAEVKPGMAATV
VFQTREVQNALLVPKNAVVNRSGQSIVYTVVDGKAMGQVVTTGIDDGRNIEILKGLNEGTTIIVKGQDFVNESQPVQIVN
GGPQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=347, Percent_Identity=27.0893371757925, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1787013, Length=291, Percent_Identity=25.4295532646048, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87082036, Length=354, Percent_Identity=25.7062146892655, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789900, Length=277, Percent_Identity=29.6028880866426, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 41816; Mature: 41816

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRSFAVFTLAFFLAATAVGGCGKKPADQEAAAAKVAVEVARVTRGNIAQPARVTGTVQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
AGTTVNVTAATPGKLKSVLVHVGDRVSRGQIIAELEDDDAAARLAQAQAGLDQARTAPAQ
CCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCHHHHHCCCCH
AEAGIKQAEARLKQAEVQAQLDEANLQRTQALFDSGAASQQQLDAARTAAAASKENLEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
RGALEAARASLASSQAQIATAEAAVRQAQVALDNCYIKAPVDGVVAARLLEPGETAQGAV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCCCCCCCEE
VTLVTTGDLQVEINVTEEDINYLQVGKKVSVEVPAAGNKALEGSVASSSPAADKSTRLYS
EEEEEECCEEEEEEECHHHCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
VKVAIPDAPAEVKPGMAATVVFQTREVQNALLVPKNAVVNRSGQSIVYTVVDGKAMGQVV
EEEECCCCCCCCCCCCEEEEEEEHHHHCCCEECCCHHHCCCCCCEEEEEEECCCHHCCEE
TTGIDDGRNIEILKGLNEGTTIIVKGQDFVNESQPVQIVNGGPQA
EECCCCCCCEEEEECCCCCCEEEEECHHHCCCCCCEEEECCCCCC
>Mature Secondary Structure
MRKRSFAVFTLAFFLAATAVGGCGKKPADQEAAAAKVAVEVARVTRGNIAQPARVTGTVQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
AGTTVNVTAATPGKLKSVLVHVGDRVSRGQIIAELEDDDAAARLAQAQAGLDQARTAPAQ
CCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCHHHHHCCCCH
AEAGIKQAEARLKQAEVQAQLDEANLQRTQALFDSGAASQQQLDAARTAAAASKENLEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
RGALEAARASLASSQAQIATAEAAVRQAQVALDNCYIKAPVDGVVAARLLEPGETAQGAV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCCCCCCCEE
VTLVTTGDLQVEINVTEEDINYLQVGKKVSVEVPAAGNKALEGSVASSSPAADKSTRLYS
EEEEEECCEEEEEEECHHHCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE
VKVAIPDAPAEVKPGMAATVVFQTREVQNALLVPKNAVVNRSGQSIVYTVVDGKAMGQVV
EEEECCCCCCCCCCCCEEEEEEEHHHHCCCEECCCHHHCCCCCCEEEEEEECCCHHCCEE
TTGIDDGRNIEILKGLNEGTTIIVKGQDFVNESQPVQIVNGGPQA
EECCCCCCCEEEEECCCCCCEEEEECHHHCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA