Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 83591049

GI number: 83591049

Start: 2322023

End: 2322712

Strand: Reverse

Name: ybfF [C]

Synonym: Moth_2228

Alternate gene names: 83591049

Gene position: 2322712-2322023 (Counterclockwise)

Preceding gene: 83591050

Following gene: 83591048

Centisome position: 88.36

GC content: 53.48

Gene sequence:

>690_bases
ATGCGCTCAACAACCCTGGTGATCATACCGGCGTATAACGAAGCGGCAACTATCGGGCAGGTTATCAAAAATATCAAACG
CTGGTGTGACGCCGATATCCTGGTAGTCAACGACGGCTCGACAGATGGCACTTCTGCCGCTGCCAGGGAGGAAAAGGTCG
CTGTTATCGACCTGCCCTGCAATCTGGGTATCGGCGGGGCCATGCAGACGGGGTACCGTTACGCCTGCCAGCACGGTTAC
GAGTTTGCCGTCCAGGTCGATGCTGACGGCCAGCATGACCCCCGCTTTATCGAGGACCTGATACACCCTCTTAGGGCCGG
GAAAGTAGATATGGTCATCGGTTCCCGGTATATTGAAAATAGGAATTACCGGGGTACCTTGGCCAGGAGAGCAGGTTCAT
GGTTCTTTACTTTTTTATTAAAGCTCTTCACTGGACAGGCTATCTACGACACCACCTCCGGTTTCCGGGCGATTAACAGG
CAGGTGCTGGCGGAGTTTGCCCGCCATTATCCCCCGGATTACCCGGAGGTGGAAGTTATCATGCAATTGCTGCGCCGGGG
CTACCACATCAAGGAAATCCCGGTGGTAATGTACCCGCGTAAGGGCGGCCACTCTTCGATAACCATGTTGAAGTCTGTTT
ATTATATGTTTAAGGTGAGCCTGGCGATGGTCATTGACTGTCTCAGGTAA

Upstream 100 bases:

>100_bases
CCCGCGACATTGCTCCGGCTGTTACCGGACCAAGCCGGATTTTATTTCCAGCAGGAATGGATAGCCGAAGGTAGAAATAT
TGGTTGGAAGGTGCGTCTTT

Downstream 100 bases:

>100_bases
CATAAGATATATTTCGTCCATAACGGCAAGTCACCGGCGGCCGGATGCACGCGTTGCTCACCGGGGTGCGGGTTCCTGGA
AACAGGCCTTAGCGACCGGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRSTTLVIIPAYNEAATIGQVIKNIKRWCDADILVVNDGSTDGTSAAAREEKVAVIDLPCNLGIGGAMQTGYRYACQHGY
EFAVQVDADGQHDPRFIEDLIHPLRAGKVDMVIGSRYIENRNYRGTLARRAGSWFFTFLLKLFTGQAIYDTTSGFRAINR
QVLAEFARHYPPDYPEVEVIMQLLRRGYHIKEIPVVMYPRKGGHSSITMLKSVYYMFKVSLAMVIDCLR

Sequences:

>Translated_229_residues
MRSTTLVIIPAYNEAATIGQVIKNIKRWCDADILVVNDGSTDGTSAAAREEKVAVIDLPCNLGIGGAMQTGYRYACQHGY
EFAVQVDADGQHDPRFIEDLIHPLRAGKVDMVIGSRYIENRNYRGTLARRAGSWFFTFLLKLFTGQAIYDTTSGFRAINR
QVLAEFARHYPPDYPEVEVIMQLLRRGYHIKEIPVVMYPRKGGHSSITMLKSVYYMFKVSLAMVIDCLR
>Mature_229_residues
MRSTTLVIIPAYNEAATIGQVIKNIKRWCDADILVVNDGSTDGTSAAAREEKVAVIDLPCNLGIGGAMQTGYRYACQHGY
EFAVQVDADGQHDPRFIEDLIHPLRAGKVDMVIGSRYIENRNYRGTLARRAGSWFFTFLLKLFTGQAIYDTTSGFRAINR
QVLAEFARHYPPDYPEVEVIMQLLRRGYHIKEIPVVMYPRKGGHSSITMLKSVYYMFKVSLAMVIDCLR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=235, Percent_Identity=25.531914893617, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=214, Percent_Identity=28.0373831775701, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24585265, Length=235, Percent_Identity=28.0851063829787, Blast_Score=80, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 25849; Mature: 25849

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSTTLVIIPAYNEAATIGQVIKNIKRWCDADILVVNDGSTDGTSAAAREEKVAVIDLPC
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCEEEEECCC
NLGIGGAMQTGYRYACQHGYEFAVQVDADGQHDPRFIEDLIHPLRAGKVDMVIGSRYIEN
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHCC
RNYRGTLARRAGSWFFTFLLKLFTGQAIYDTTSGFRAINRQVLAEFARHYPPDYPEVEVI
CCCCHHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MQLLRRGYHIKEIPVVMYPRKGGHSSITMLKSVYYMFKVSLAMVIDCLR
HHHHHCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSTTLVIIPAYNEAATIGQVIKNIKRWCDADILVVNDGSTDGTSAAAREEKVAVIDLPC
CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCEEEEECCC
NLGIGGAMQTGYRYACQHGYEFAVQVDADGQHDPRFIEDLIHPLRAGKVDMVIGSRYIEN
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHCC
RNYRGTLARRAGSWFFTFLLKLFTGQAIYDTTSGFRAINRQVLAEFARHYPPDYPEVEVI
CCCCHHHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHH
MQLLRRGYHIKEIPVVMYPRKGGHSSITMLKSVYYMFKVSLAMVIDCLR
HHHHHCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]