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The map label for this gene is cdaR [H]

Identifier: 83590927

GI number: 83590927

Start: 2193384

End: 2194565

Strand: Reverse

Name: cdaR [H]

Synonym: Moth_2101

Alternate gene names: 83590927

Gene position: 2194565-2193384 (Counterclockwise)

Preceding gene: 83590928

Following gene: 83590926

Centisome position: 83.48

GC content: 53.3

Gene sequence:

>1182_bases
ATGTTAAACCAGGAATTAATCCAGCCCCTGCTGGAACGGGCCGCAGCCCTCTGGCAAACAGCCATTGACGTCGTTGACCC
TGGGGGTCAGGTAGTAGCCAGCTCGGAACCTTCACGGTTGCATTTTTACCATCCGGAGGTGCTGGGACTTTCACTTACGG
AAGATGGAGTTCGCGTTCAAGGTGAAAGTTACTATCTTCCCCTGGTAATAAATGACCGCGTGGCCGGCTGGCTGGTATGG
CAGGGGGGTGTTAAGGGCGAAGTTGCCACCCTGTTGCAGGCCGCTCTGGAGGAAATCTTGGCGGCGGCCAGGCGGCGGGA
TCAGCAGTATTTCACCGCCCGGGAGGAAGAAGCCCTGGTTGCCGATCTTCTGGCCCGGGAGGCGGCCTCCCGGGTTGAGG
AATTAAAGGTAAGGGCGCTGAATTCGGGTTATGACTTGAACCTGCCCCGGGCGGTTATAGTATTACAATTGGAACCCAGG
GAAAACCGCTACTTCAACATTAATTTGCACCTGGGGTATGATGTTACAGAGGAGCAGTTAAAGGAGGAAATCCTGGAGCA
AATAAAGGGCGATCTTTACCTGACCGCCCAGGATCTAGTGGCTTATTATGGCAGAGAGATGCTGGTCATTTTTAAGGCTT
TTTTAGAAGTAGAGAATATGGGCCGCCTCTACCAGGCCCTGGAGGTTATCTGTCGGCACCTGTATGAGTTGATCAAAGAT
AACCGTCTCTTTGCTGTCCGGGTGGCCTACGGGAGCATTGTCACGGAAATCGCTGGTTTAAGGCAGTCCTATAAGGAGGC
AGCCGAATTGATTGCCCTGGGCCATTCCTGCGGTCATAATAGCGGCTATATTGATTTCGAAGACATTCTTTTTGAGGCCC
TGGTGTGTTCCCTGCCGGGGCGGTTGAGGGGTAGATATCTGGAACCCCTTTATCAGAAAATTGTAGCGGCTGGCGAAGAA
GGTATCCAGTTGCTGGAGACGGTGGAAGCCTGCATCGACAACAATATGAATATCAAGCAGACGGCTGAGCAACTATACCT
GCACCGCAACACTGTAACCAATCGCCTGGAGAGAATCAAGCTCCTGACGGGCCTGGACCCGGGAACGGGTTTTCGCGCCC
TTTTCTGGCTGAAAATGCTGGCCGTCTACAGGAGATTGGTGCAGACACGGGATGAGGCGTAA

Upstream 100 bases:

>100_bases
TTTTTATACAGATGTTCAGAAAAAAGTCGATAAAAAGACGACCGGGCTCGAATGATTCTTTCCTAAAGTAGGGATCTCCT
TCCCGGAAAGGGGGATACCT

Downstream 100 bases:

>100_bases
TAGTTATTCGGGACGGAAAGAAGACCTCCCTGGTAATGTAATGTACAGGGTCATACCCTACTGCGCTATCGGGATGCTTT
CAAAGAAGATCAAGACCAGG

Product: CdaR family transcriptional regulator

Products: NA

Alternate protein names: Sugar diacid regulator [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MLNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTEDGVRVQGESYYLPLVINDRVAGWLVW
QGGVKGEVATLLQAALEEILAAARRRDQQYFTAREEEALVADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPR
ENRYFNINLHLGYDVTEEQLKEEILEQIKGDLYLTAQDLVAYYGREMLVIFKAFLEVENMGRLYQALEVICRHLYELIKD
NRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCGHNSGYIDFEDILFEALVCSLPGRLRGRYLEPLYQKIVAAGEE
GIQLLETVEACIDNNMNIKQTAEQLYLHRNTVTNRLERIKLLTGLDPGTGFRALFWLKMLAVYRRLVQTRDEA

Sequences:

>Translated_393_residues
MLNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTEDGVRVQGESYYLPLVINDRVAGWLVW
QGGVKGEVATLLQAALEEILAAARRRDQQYFTAREEEALVADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPR
ENRYFNINLHLGYDVTEEQLKEEILEQIKGDLYLTAQDLVAYYGREMLVIFKAFLEVENMGRLYQALEVICRHLYELIKD
NRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCGHNSGYIDFEDILFEALVCSLPGRLRGRYLEPLYQKIVAAGEE
GIQLLETVEACIDNNMNIKQTAEQLYLHRNTVTNRLERIKLLTGLDPGTGFRALFWLKMLAVYRRLVQTRDEA
>Mature_393_residues
MLNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTEDGVRVQGESYYLPLVINDRVAGWLVW
QGGVKGEVATLLQAALEEILAAARRRDQQYFTAREEEALVADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPR
ENRYFNINLHLGYDVTEEQLKEEILEQIKGDLYLTAQDLVAYYGREMLVIFKAFLEVENMGRLYQALEVICRHLYELIKD
NRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCGHNSGYIDFEDILFEALVCSLPGRLRGRYLEPLYQKIVAAGEE
GIQLLETVEACIDNNMNIKQTAEQLYLHRNTVTNRLERIKLLTGLDPGTGFRALFWLKMLAVYRRLVQTRDEA

Specific function: Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization [H]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=391, Percent_Identity=25.3196930946292, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 44595; Mature: 44595

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTEDGVRVQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCEEC
GESYYLPLVINDRVAGWLVWQGGVKGEVATLLQAALEEILAAARRRDQQYFTAREEEALV
CCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPRENRYFNINLHLGYDVTEEQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHH
KEEILEQIKGDLYLTAQDLVAYYGREMLVIFKAFLEVENMGRLYQALEVICRHLYELIKD
HHHHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCGHNSGYIDFEDILFEALVCSLPG
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCH
RLRGRYLEPLYQKIVAAGEEGIQLLETVEACIDNNMNIKQTAEQLYLHRNTVTNRLERIK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLTGLDPGTGFRALFWLKMLAVYRRLVQTRDEA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNQELIQPLLERAAALWQTAIDVVDPGGQVVASSEPSRLHFYHPEVLGLSLTEDGVRVQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCEEC
GESYYLPLVINDRVAGWLVWQGGVKGEVATLLQAALEEILAAARRRDQQYFTAREEEALV
CCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ADLLAREAASRVEELKVRALNSGYDLNLPRAVIVLQLEPRENRYFNINLHLGYDVTEEQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHH
KEEILEQIKGDLYLTAQDLVAYYGREMLVIFKAFLEVENMGRLYQALEVICRHLYELIKD
HHHHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRLFAVRVAYGSIVTEIAGLRQSYKEAAELIALGHSCGHNSGYIDFEDILFEALVCSLPG
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCH
RLRGRYLEPLYQKIVAAGEEGIQLLETVEACIDNNMNIKQTAEQLYLHRNTVTNRLERIK
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLTGLDPGTGFRALFWLKMLAVYRRLVQTRDEA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 10762278 [H]