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The map label for this gene is xylH [H]

Identifier: 83590850

GI number: 83590850

Start: 2106914

End: 2108107

Strand: Reverse

Name: xylH [H]

Synonym: Moth_2020

Alternate gene names: 83590850

Gene position: 2108107-2106914 (Counterclockwise)

Preceding gene: 83590851

Following gene: 83590846

Centisome position: 80.19

GC content: 41.71

Gene sequence:

>1194_bases
GTGTTTAATCTTATTAAAACTATTTCCCCTGCAGAAACGGTACAATCTAAACCTAAAGCGAATGGGTATTTAAGTAGAAT
AGATATACGCGCTTATACAATGATATTAGCCTTATTGGGTATATGGGCTATTTTCACTTATACTACCCAGGGTGCTTTTT
TGACTTCCCGTAATCTATCAAACCTCTTCAGGCAGATGTCAATTACCTCTATTTTAGCGATAGGTATGGTCTTTGTAATA
GTAGCCGGTCATATTGACCTTTCCGTAGGTTCTCTCATGGGACTTACTGGAGGGGTAGCGGCAATTTTACAGGTCTGGTA
TGGTTGGCAGACCATTCCTGCTATTTTTATAAGCTTTTTAATTGGTCTGCTGGCCGGCTTATGGCAGGGCTGGTGGGTTG
CCTATAAAAAGGTGCCTGCTTTCATTGTCACCCTGGGCGGTATGATGGTATTTCGGGGAATTCTAATAGGAATTAGTCAT
GGCGAAACAGTTTCGCCTCTCATGGATAGTTTTAAACAAATAGGCCAATCCTATGTACCTGAAAGTACAGGCTTCTTATT
AGCATTCCTGGGTATTATTTATGTGATCTATGTTACTGTAAAGCAACGGTATACTAGAATTAAGTATGGTTTTACTGTGC
CTTCTTTAGCTCTGGAAATAATGCGTACCATTTTTTACGCCTTTCTCATTGGCCTTTTTGTCTATCTAATGAATGATTAC
CAGGGTATACCTGTACCTGTCCTAATCGTAGTGGCGATGGCATTTATTTTTACGGGTTTAGCAACGAAAACTCGCTTCGG
GCGTTATGTCTACGCAATTGGTGGTAACAGTGAAGCAGCACGTTTATCCGGTATTAATATTCGATATAACATCCTGGCCG
TTTTTGTTATCAGTGGGTTAATGGCTGCCTTAAGCGGTATCCTGTTAACTGCAAGATTAAACGGTGCTTCAGTAGCTGCA
GGGCAAAATGCTGAGCTTGATGCCATTGCAGCGTGCGTTATAGGTGGTACAAGTCTTATGGGTGGTACAGGTAGTATTGG
TGGGGCGATGATAGGAGCACTTGTTATGGCCAGTTTAGATAATGGCCTGAGCATGATGAATACCCCGACCTTCTGGCAGT
TTATAGTTAAAGGTTTGATTCTTGTGCTGGCGGTATGGATCGATATCGCAACTAAAACAAGGGCTCAAAATTGA

Upstream 100 bases:

>100_bases
CGTATTTTGGTGTTATGTGAAGGTAGAATAACTGGCGAGTTTTCCCGTGAAGAAGCTACAGAAGAAAAAATAATGGCCTG
TGCAACTGGAGGTAAGTAAA

Downstream 100 bases:

>100_bases
TCGAAACAGACTTTAAGTGCCCAATCAGTTGCGATGCCCCGCATATGTAATAAGCTTGGATATAAATTATATGTGCTTAT
ATCCTAACTTGGAAGGAAGC

Product: inner-membrane translocator

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MFNLIKTISPAETVQSKPKANGYLSRIDIRAYTMILALLGIWAIFTYTTQGAFLTSRNLSNLFRQMSITSILAIGMVFVI
VAGHIDLSVGSLMGLTGGVAAILQVWYGWQTIPAIFISFLIGLLAGLWQGWWVAYKKVPAFIVTLGGMMVFRGILIGISH
GETVSPLMDSFKQIGQSYVPESTGFLLAFLGIIYVIYVTVKQRYTRIKYGFTVPSLALEIMRTIFYAFLIGLFVYLMNDY
QGIPVPVLIVVAMAFIFTGLATKTRFGRYVYAIGGNSEAARLSGINIRYNILAVFVISGLMAALSGILLTARLNGASVAA
GQNAELDAIAACVIGGTSLMGGTGSIGGAMIGALVMASLDNGLSMMNTPTFWQFIVKGLILVLAVWIDIATKTRAQN

Sequences:

>Translated_397_residues
MFNLIKTISPAETVQSKPKANGYLSRIDIRAYTMILALLGIWAIFTYTTQGAFLTSRNLSNLFRQMSITSILAIGMVFVI
VAGHIDLSVGSLMGLTGGVAAILQVWYGWQTIPAIFISFLIGLLAGLWQGWWVAYKKVPAFIVTLGGMMVFRGILIGISH
GETVSPLMDSFKQIGQSYVPESTGFLLAFLGIIYVIYVTVKQRYTRIKYGFTVPSLALEIMRTIFYAFLIGLFVYLMNDY
QGIPVPVLIVVAMAFIFTGLATKTRFGRYVYAIGGNSEAARLSGINIRYNILAVFVISGLMAALSGILLTARLNGASVAA
GQNAELDAIAACVIGGTSLMGGTGSIGGAMIGALVMASLDNGLSMMNTPTFWQFIVKGLILVLAVWIDIATKTRAQN
>Mature_397_residues
MFNLIKTISPAETVQSKPKANGYLSRIDIRAYTMILALLGIWAIFTYTTQGAFLTSRNLSNLFRQMSITSILAIGMVFVI
VAGHIDLSVGSLMGLTGGVAAILQVWYGWQTIPAIFISFLIGLLAGLWQGWWVAYKKVPAFIVTLGGMMVFRGILIGISH
GETVSPLMDSFKQIGQSYVPESTGFLLAFLGIIYVIYVTVKQRYTRIKYGFTVPSLALEIMRTIFYAFLIGLFVYLMNDY
QGIPVPVLIVVAMAFIFTGLATKTRFGRYVYAIGGNSEAARLSGINIRYNILAVFVISGLMAALSGILLTARLNGASVAA
GQNAELDAIAACVIGGTSLMGGTGSIGGAMIGALVMASLDNGLSMMNTPTFWQFIVKGLILVLAVWIDIATKTRAQN

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=389, Percent_Identity=53.4704370179949, Blast_Score=384, Evalue=1e-108,
Organism=Escherichia coli, GI1790524, Length=348, Percent_Identity=32.7586206896552, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1790191, Length=150, Percent_Identity=47.3333333333333, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788896, Length=163, Percent_Identity=42.3312883435583, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI145693152, Length=150, Percent_Identity=41.3333333333333, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87082395, Length=339, Percent_Identity=29.2035398230088, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788471, Length=349, Percent_Identity=31.5186246418338, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787794, Length=147, Percent_Identity=31.9727891156463, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787793, Length=129, Percent_Identity=37.984496124031, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI145693214, Length=128, Percent_Identity=39.84375, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42836; Mature: 42836

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]