Click here to switch to the map view.

The map label for this gene is yqeB [H]

Identifier: 83590832

GI number: 83590832

Start: 2088495

End: 2089295

Strand: Reverse

Name: yqeB [H]

Synonym: Moth_2002

Alternate gene names: 83590832

Gene position: 2089295-2088495 (Counterclockwise)

Preceding gene: 83590833

Following gene: 83590831

Centisome position: 79.48

GC content: 62.92

Gene sequence:

>801_bases
GTGGCCCGGGAACTAGTAGTTATTAAAGGGGCCGGCGACCTGGCCAGCGGGGTGGCCCACCGCCTGCACCAGTCCGGCTT
TCAGGTGATCATGACAGAGATCCCCAGGCCGACGGTAATTCGCCGGGCAGTGGCATTCGCGGAAGCTGTATATAGCGGGG
AAATAACGGTCGAAGGGGTCACCGCCCGCCTGGTTTCCGATCCGGAAGGTGCCCTGAGGGTAACCTGGCAGGGGGAGGTT
GCCGTCCTGGTGGACCCCCGGGCGGAGGTTATTGCCGCCCTGAAGCCCCGGGTAGTTGTCGACGCCATCCTGGCCAAGAC
CAACCTTGGGACGCGCATCGACCAGGCTCCCATTGTCATTGCCCTCGGTCCCGGCTTTACCGCCGGCACGGACGCCCATG
CGGTCATTGAAACCCAACGCGGCCACTACCTGGGCCGGGTAATCTGGCAGGGGGCGGCGGCGGCCAATACCGGCATCCCC
GGTGAGGTCATGGGCTACAGGGAAGAAAGGGTCTTGCGAGCACCGGTAGCAGGTATCTTCAAGAGCTGCAAGGCAATCGG
CGACTCGGTAAAGGCCGGGGAAACGGTGGCTACAGTTAACGATGTTCCACTGCGGGCGCAGATCGGCGGCGTGTTGCGGG
GTGTTCTCCACGATGGTCTCGAGGTGACTGCAGGCCAGAAAGCCGGCGATGTCGACCCCAGGGGTGAGCGGGACTACTGC
TTCACCATTTCTGATAAAGCCCGGGCCATTGGCGGCGGCGTCCTGGAGGCTATCCTGCACCTTAAAGGCTATATATCCTG
A

Upstream 100 bases:

>100_bases
ACAGATGTACAATATAGTTAAATGATATTTAACTCTGACCGGTACGCAAAGGCAAAGCGGGTGCGATAAGAGCTATTTTT
TAGGAGGAGCGAGGAGAGCA

Downstream 100 bases:

>100_bases
TTTTTTTGTCCAGGTAGTAGATAAATGGTGAGACGGGTGAAACGCCATTCGCCAGCCCCTCTCTTTCGCCAGAAACAAAA
CTGTGTTAGAATAGGTTTAC

Product: biotin/lipoyl attachment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MARELVVIKGAGDLASGVAHRLHQSGFQVIMTEIPRPTVIRRAVAFAEAVYSGEITVEGVTARLVSDPEGALRVTWQGEV
AVLVDPRAEVIAALKPRVVVDAILAKTNLGTRIDQAPIVIALGPGFTAGTDAHAVIETQRGHYLGRVIWQGAAAANTGIP
GEVMGYREERVLRAPVAGIFKSCKAIGDSVKAGETVATVNDVPLRAQIGGVLRGVLHDGLEVTAGQKAGDVDPRGERDYC
FTISDKARAIGGGVLEAILHLKGYIS

Sequences:

>Translated_266_residues
MARELVVIKGAGDLASGVAHRLHQSGFQVIMTEIPRPTVIRRAVAFAEAVYSGEITVEGVTARLVSDPEGALRVTWQGEV
AVLVDPRAEVIAALKPRVVVDAILAKTNLGTRIDQAPIVIALGPGFTAGTDAHAVIETQRGHYLGRVIWQGAAAANTGIP
GEVMGYREERVLRAPVAGIFKSCKAIGDSVKAGETVATVNDVPLRAQIGGVLRGVLHDGLEVTAGQKAGDVDPRGERDYC
FTISDKARAIGGGVLEAILHLKGYIS
>Mature_265_residues
ARELVVIKGAGDLASGVAHRLHQSGFQVIMTEIPRPTVIRRAVAFAEAVYSGEITVEGVTARLVSDPEGALRVTWQGEVA
VLVDPRAEVIAALKPRVVVDAILAKTNLGTRIDQAPIVIALGPGFTAGTDAHAVIETQRGHYLGRVIWQGAAAANTGIPG
EVMGYREERVLRAPVAGIFKSCKAIGDSVKAGETVATVNDVPLRAQIGGVLRGVLHDGLEVTAGQKAGDVDPRGERDYCF
TISDKARAIGGGVLEAILHLKGYIS

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=259, Percent_Identity=57.9150579150579, Blast_Score=301, Evalue=3e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 27923; Mature: 27791

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARELVVIKGAGDLASGVAHRLHQSGFQVIMTEIPRPTVIRRAVAFAEAVYSGEITVEGV
CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEE
TARLVSDPEGALRVTWQGEVAVLVDPRAEVIAALKPRVVVDAILAKTNLGTRIDQAPIVI
EEEEECCCCCCEEEEECCCEEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEE
ALGPGFTAGTDAHAVIETQRGHYLGRVIWQGAAAANTGIPGEVMGYREERVLRAPVAGIF
EECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
KSCKAIGDSVKAGETVATVNDVPLRAQIGGVLRGVLHDGLEVTAGQKAGDVDPRGERDYC
HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEE
FTISDKARAIGGGVLEAILHLKGYIS
EEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARELVVIKGAGDLASGVAHRLHQSGFQVIMTEIPRPTVIRRAVAFAEAVYSGEITVEGV
CCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEE
TARLVSDPEGALRVTWQGEVAVLVDPRAEVIAALKPRVVVDAILAKTNLGTRIDQAPIVI
EEEEECCCCCCEEEEECCCEEEEECCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEE
ALGPGFTAGTDAHAVIETQRGHYLGRVIWQGAAAANTGIPGEVMGYREERVLRAPVAGIF
EECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
KSCKAIGDSVKAGETVATVNDVPLRAQIGGVLRGVLHDGLEVTAGQKAGDVDPRGERDYC
HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEE
FTISDKARAIGGGVLEAILHLKGYIS
EEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]