Click here to switch to the map view.

The map label for this gene is rfaG [C]

Identifier: 83590766

GI number: 83590766

Start: 2008257

End: 2009597

Strand: Reverse

Name: rfaG [C]

Synonym: Moth_1934

Alternate gene names: 83590766

Gene position: 2009597-2008257 (Counterclockwise)

Preceding gene: 83590769

Following gene: 83590764

Centisome position: 76.45

GC content: 62.71

Gene sequence:

>1341_bases
ATGCGGATCTTGATGCTTTCCTGGGAATACCCGCCCCAGAGTGTCGGCGGCTTGGCCCGCCATGTGGAGGATCTGGCTAT
CTCCCTGGCGGCCCGCCATGATGTTCACGTCCTGACTATTGGCCGACCCGGAGAAGCTTTCGAGAGCCGGGAGAACGGGT
TGACCGTCCACCGGGTGGAAGCCTACCCCGTTCATCCCCCTGATTTTCTCGTCTGGGTGCTGCAACTGAATGCCCGCTTT
ATGGAAGAGGCCATGATCCTCATGCGCCGGTACGGCCCCTTCCAGATTATCCACGCCCACGATTGGCTGGTGGCCTTTAC
CGGCCGGGCTTTGAAGCACGCTTATCATTTACCCCTCATCGCCACCATCCACGCCACCGAGGCGGGCCGCAACCGCGGCC
TCCACAACGACATGCAGCGCTACATTAACAGCGTCGAATGGTGGCTGACCTACGAAGCCTGGCGGGTCATTGTCTGCAGC
CGGCATATGCGCCAGGAGGTCCAGGGGTTATTCCAGCTGCCGGCTGACAAGATTACCATTATACCCAACGGAGTGTATAG
CAAAAAGTTCCGGGCCGGGACAGTCGACCCGGAGGTCCGGCGGCGTTACGCCGCGCCTAACGAGAAAATCCTCTTCTTTG
TCGGCCGCCTGGTGATCGAAAAGGGAGTCCAGGTGCTCCTGGAGGCCATGCCTCGCATCCTCTCCTCTTGCCCGGAGGCC
AAACTGGTGGTTGCCGGCCGGGGACCCATGGAAGGCCAGCTCCAGAACCGGGCCCGGGAACTGGGAATCGGCCACAAGGT
CTGTTTTGCCGGCTATATTGACGACCGGACCCGCAACCAGCTCTACCGGGCCGCCAGGGTGGCTGTCTTCCCCAGCCTTT
ACGAGCCCTTCGGTATCGTCGCCCTGGAGGCCATGGCCGCCGGGACGCCGGTGGTGGCCAGCGAAACAGGCGGCCTGGCG
GAGATAATCACTCACGGCGTTGACGGCATGCGCGCCTATCCGGGCAACGCCAATTCCCTGGCCGACAACATCCTGGCGGT
CCTGCAGGATGACGCTCTGGTTGCGAAACTCAGCGCCAACGGCCGTCGCCTGGTAGCAGAGGTTTACGACTGGGAAAATA
TCGCCCGGCGCACGGCTGACGTCTACCAGGAGGTTTACAACCAGTATCGTCGCACCCCCTGGCCGGAACGGACCCCGGTA
ATAGCCCGCCTGTGGCGCTTCGTCCCTTACGTAGCCGGGGACCAGGACAGAGAACAACCACTGCCCCTGGGGGGGCGCTA
TGACCTGGCCCGGTACCGGGCTACTCTGGTAAACCAGCACCGGGGCAGGAGCGAGGGGTAG

Upstream 100 bases:

>100_bases
TTCCCCGGTTGGCGGCTTTGACCGAAGGCTTGTTTGGAAGTATTAAAGCCGGCCGGCATTGCCAGAATAATAGAGAGATG
CTAAACGAAGGTGGCAGGTT

Downstream 100 bases:

>100_bases
GTTCACCTTCCCAGGCCCGGGAAGAGTTCCAGCAGGCCGGAAGCGCCCATCTGGACGGCGATCACTGCCAGGAGGAGACC
CATGACGCGGCTGATGATAT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRILMLSWEYPPQSVGGLARHVEDLAISLAARHDVHVLTIGRPGEAFESRENGLTVHRVEAYPVHPPDFLVWVLQLNARF
MEEAMILMRRYGPFQIIHAHDWLVAFTGRALKHAYHLPLIATIHATEAGRNRGLHNDMQRYINSVEWWLTYEAWRVIVCS
RHMRQEVQGLFQLPADKITIIPNGVYSKKFRAGTVDPEVRRRYAAPNEKILFFVGRLVIEKGVQVLLEAMPRILSSCPEA
KLVVAGRGPMEGQLQNRARELGIGHKVCFAGYIDDRTRNQLYRAARVAVFPSLYEPFGIVALEAMAAGTPVVASETGGLA
EIITHGVDGMRAYPGNANSLADNILAVLQDDALVAKLSANGRRLVAEVYDWENIARRTADVYQEVYNQYRRTPWPERTPV
IARLWRFVPYVAGDQDREQPLPLGGRYDLARYRATLVNQHRGRSEG

Sequences:

>Translated_446_residues
MRILMLSWEYPPQSVGGLARHVEDLAISLAARHDVHVLTIGRPGEAFESRENGLTVHRVEAYPVHPPDFLVWVLQLNARF
MEEAMILMRRYGPFQIIHAHDWLVAFTGRALKHAYHLPLIATIHATEAGRNRGLHNDMQRYINSVEWWLTYEAWRVIVCS
RHMRQEVQGLFQLPADKITIIPNGVYSKKFRAGTVDPEVRRRYAAPNEKILFFVGRLVIEKGVQVLLEAMPRILSSCPEA
KLVVAGRGPMEGQLQNRARELGIGHKVCFAGYIDDRTRNQLYRAARVAVFPSLYEPFGIVALEAMAAGTPVVASETGGLA
EIITHGVDGMRAYPGNANSLADNILAVLQDDALVAKLSANGRRLVAEVYDWENIARRTADVYQEVYNQYRRTPWPERTPV
IARLWRFVPYVAGDQDREQPLPLGGRYDLARYRATLVNQHRGRSEG
>Mature_446_residues
MRILMLSWEYPPQSVGGLARHVEDLAISLAARHDVHVLTIGRPGEAFESRENGLTVHRVEAYPVHPPDFLVWVLQLNARF
MEEAMILMRRYGPFQIIHAHDWLVAFTGRALKHAYHLPLIATIHATEAGRNRGLHNDMQRYINSVEWWLTYEAWRVIVCS
RHMRQEVQGLFQLPADKITIIPNGVYSKKFRAGTVDPEVRRRYAAPNEKILFFVGRLVIEKGVQVLLEAMPRILSSCPEA
KLVVAGRGPMEGQLQNRARELGIGHKVCFAGYIDDRTRNQLYRAARVAVFPSLYEPFGIVALEAMAAGTPVVASETGGLA
EIITHGVDGMRAYPGNANSLADNILAVLQDDALVAKLSANGRRLVAEVYDWENIARRTADVYQEVYNQYRRTPWPERTPV
IARLWRFVPYVAGDQDREQPLPLGGRYDLARYRATLVNQHRGRSEG

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=391, Percent_Identity=22.7621483375959, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17532709, Length=229, Percent_Identity=23.1441048034935, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32564184, Length=298, Percent_Identity=21.4765100671141, Blast_Score=68, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=403, Percent_Identity=24.5657568238213, Blast_Score=98, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 50513; Mature: 50513

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILMLSWEYPPQSVGGLARHVEDLAISLAARHDVHVLTIGRPGEAFESRENGLTVHRVE
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEEEE
AYPVHPPDFLVWVLQLNARFMEEAMILMRRYGPFQIIHAHDWLVAFTGRALKHAYHLPLI
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHCCCEE
ATIHATEAGRNRGLHNDMQRYINSVEWWLTYEAWRVIVCSRHMRQEVQGLFQLPADKITI
EEEEECCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IPNGVYSKKFRAGTVDPEVRRRYAAPNEKILFFVGRLVIEKGVQVLLEAMPRILSSCPEA
EECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KLVVAGRGPMEGQLQNRARELGIGHKVCFAGYIDDRTRNQLYRAARVAVFPSLYEPFGIV
EEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ALEAMAAGTPVVASETGGLAEIITHGVDGMRAYPGNANSLADNILAVLQDDALVAKLSAN
HHHHHHCCCCEEECCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCEEEEECCC
GRRLVAEVYDWENIARRTADVYQEVYNQYRRTPWPERTPVIARLWRFVPYVAGDQDREQP
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
LPLGGRYDLARYRATLVNQHRGRSEG
CCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRILMLSWEYPPQSVGGLARHVEDLAISLAARHDVHVLTIGRPGEAFESRENGLTVHRVE
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEEEE
AYPVHPPDFLVWVLQLNARFMEEAMILMRRYGPFQIIHAHDWLVAFTGRALKHAYHLPLI
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHCCCEE
ATIHATEAGRNRGLHNDMQRYINSVEWWLTYEAWRVIVCSRHMRQEVQGLFQLPADKITI
EEEEECCCCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IPNGVYSKKFRAGTVDPEVRRRYAAPNEKILFFVGRLVIEKGVQVLLEAMPRILSSCPEA
EECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KLVVAGRGPMEGQLQNRARELGIGHKVCFAGYIDDRTRNQLYRAARVAVFPSLYEPFGIV
EEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHH
ALEAMAAGTPVVASETGGLAEIITHGVDGMRAYPGNANSLADNILAVLQDDALVAKLSAN
HHHHHHCCCCEEECCCCCHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCEEEEECCC
GRRLVAEVYDWENIARRTADVYQEVYNQYRRTPWPERTPVIARLWRFVPYVAGDQDREQP
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
LPLGGRYDLARYRATLVNQHRGRSEG
CCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]