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The map label for this gene is nifU [H]

Identifier: 83590487

GI number: 83590487

Start: 1686134

End: 1686511

Strand: Reverse

Name: nifU [H]

Synonym: Moth_1651

Alternate gene names: 83590487

Gene position: 1686511-1686134 (Counterclockwise)

Preceding gene: 83590488

Following gene: 83590486

Centisome position: 64.16

GC content: 53.17

Gene sequence:

>378_bases
GTGTACTCGGAAAAAGTCATGGATCATTTCACCAATCCCCGCAACGTCGGTGAGATTGAGAATGCCGACGGGGTCGGCCA
GGTAGGCAATCCCGTCTGTGGCGATATTATGCGCCTATATATCAAAGTCGAAGACGGTATTATCAAGGATGTCAAATTTA
AAACCTTCGGCTGCGGGGCTGCCATTGCCACCAGCAGTATGGTCACAGAAATGGTCAAGGGCAAGACCGTGGAAGAGGCC
CTCAAAATCAGCAACGCGGCCGTGGCCGAGGCCCTGGACGGGCTTCCGCCCCAGAAGATGCACTGTTCCAACCTGGCCGC
CGATGCCCTGCATAAAGCCATCGAGGATTACCAGAATAGAAATAAGAAAGCCTCCTAA

Upstream 100 bases:

>100_bases
AGGAGGCCGCAGGGAAGAGGTAGGGGTTACCTGGCAGGAAGCCCCCCGCAAGAGGTCGTGTTTTGGTGCGAGGATATTTT
CCCTAGAAGGAGTGAGCAGG

Downstream 100 bases:

>100_bases
GGAGCCCTCCACGCGGCGAACGGTCGTGAGCAGAATAACTTCGGAGGAGCCCTTCATGGAGGCTAGTACCACCCCCAGCG
AAAACATGAAACTGCAGGCT

Product: nitrogen-fixing NifU-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MYSEKVMDHFTNPRNVGEIENADGVGQVGNPVCGDIMRLYIKVEDGIIKDVKFKTFGCGAAIATSSMVTEMVKGKTVEEA
LKISNAAVAEALDGLPPQKMHCSNLAADALHKAIEDYQNRNKKAS

Sequences:

>Translated_125_residues
MYSEKVMDHFTNPRNVGEIENADGVGQVGNPVCGDIMRLYIKVEDGIIKDVKFKTFGCGAAIATSSMVTEMVKGKTVEEA
LKISNAAVAEALDGLPPQKMHCSNLAADALHKAIEDYQNRNKKAS
>Mature_125_residues
MYSEKVMDHFTNPRNVGEIENADGVGQVGNPVCGDIMRLYIKVEDGIIKDVKFKTFGCGAAIATSSMVTEMVKGKTVEEA
LKISNAAVAEALDGLPPQKMHCSNLAADALHKAIEDYQNRNKKAS

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI56699456, Length=122, Percent_Identity=56.5573770491803, Blast_Score=139, Evalue=6e-34,
Organism=Homo sapiens, GI24307953, Length=125, Percent_Identity=54.4, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1788878, Length=125, Percent_Identity=58.4, Blast_Score=148, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17543474, Length=126, Percent_Identity=53.968253968254, Blast_Score=138, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6325122, Length=126, Percent_Identity=53.968253968254, Blast_Score=140, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6324800, Length=125, Percent_Identity=53.6, Blast_Score=139, Evalue=1e-34,
Organism=Drosophila melanogaster, GI21355597, Length=127, Percent_Identity=53.5433070866142, Blast_Score=138, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 13501; Mature: 13501

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSEKVMDHFTNPRNVGEIENADGVGQVGNPVCGDIMRLYIKVEDGIIKDVKFKTFGCGA
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AIATSSMVTEMVKGKTVEEALKISNAAVAEALDGLPPQKMHCSNLAADALHKAIEDYQNR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
NKKAS
CCCCC
>Mature Secondary Structure
MYSEKVMDHFTNPRNVGEIENADGVGQVGNPVCGDIMRLYIKVEDGIIKDVKFKTFGCGA
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AIATSSMVTEMVKGKTVEEALKISNAAVAEALDGLPPQKMHCSNLAADALHKAIEDYQNR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
NKKAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]