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The map label for this gene is yqgF [C]

Identifier: 83590476

GI number: 83590476

Start: 1675874

End: 1676296

Strand: Reverse

Name: yqgF [C]

Synonym: Moth_1640

Alternate gene names: 83590476

Gene position: 1676296-1675874 (Counterclockwise)

Preceding gene: 83590477

Following gene: 83590475

Centisome position: 63.77

GC content: 64.07

Gene sequence:

>423_bases
ATGCGGATTATGGGCCTGGACGTGGGCACAAAAACCATCGGGGTGGCCCTGAGCGACCCCTTGGGCTGGACGGCCCAGGG
CCTGACCACCATCCGCCGGCGCAACCTGGCCGCCGACCTGGCGGCCCTGAAAGAACTGGTACGGCGCTACGGTGTGGAGG
AGCTGGTAGTAGGCCTGCCCCGCAATATGAACGGCAGCCTGGGTCCCCAGGCAGAAGCAGTACGCGCCTTCGCCCGGCAT
TTACAGGCCGAGGTAGGGCTGCCGGTACATTTTTTTGACGAACGACTAACGACGGTAGCCGCTGGCAGGGTGCTCCTGGA
GGCCGACCTCTCCCGTCGGCGCCGGCGGCAGGTCATCGACCAGGTGGCGGCCACTTATATTTTGCAGGGATACCTTGACC
GTCTGGGGCAAAATGGGGTATGA

Upstream 100 bases:

>100_bases
TGGAGGTTATCGAGGGCCGCGCTGTCGTCGACCCGGAGCGCTGCATCCTCTGCGGCTACTGCGCCGGGGCCTGCCGTGAT
TTCTGTATTAAGGTGATCTA

Downstream 100 bases:

>100_bases
TAACCCCATCCTGGAAAAAAGGGGTGAGGTCATGGCCGATCAGGAAAATACCATTATCCTGACGGATGATGAAGGCCATG
AGCACGAGTTTATCGTCGTC

Product: Holliday junction resolvase YqgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRIMGLDVGTKTIGVALSDPLGWTAQGLTTIRRRNLAADLAALKELVRRYGVEELVVGLPRNMNGSLGPQAEAVRAFARH
LQAEVGLPVHFFDERLTTVAAGRVLLEADLSRRRRRQVIDQVAATYILQGYLDRLGQNGV

Sequences:

>Translated_140_residues
MRIMGLDVGTKTIGVALSDPLGWTAQGLTTIRRRNLAADLAALKELVRRYGVEELVVGLPRNMNGSLGPQAEAVRAFARH
LQAEVGLPVHFFDERLTTVAAGRVLLEADLSRRRRRQVIDQVAATYILQGYLDRLGQNGV
>Mature_140_residues
MRIMGLDVGTKTIGVALSDPLGWTAQGLTTIRRRNLAADLAALKELVRRYGVEELVVGLPRNMNGSLGPQAEAVRAFARH
LQAEVGLPVHFFDERLTTVAAGRVLLEADLSRRRRRQVIDQVAATYILQGYLDRLGQNGV

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

Organism=Escherichia coli, GI1789318, Length=132, Percent_Identity=32.5757575757576, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_MOOTA (Q2RHZ7)

Other databases:

- EMBL:   CP000232
- RefSeq:   YP_430485.1
- ProteinModelPortal:   Q2RHZ7
- SMR:   Q2RHZ7
- STRING:   Q2RHZ7
- GeneID:   3831269
- GenomeReviews:   CP000232_GR
- KEGG:   mta:Moth_1640
- NMPDR:   fig|264732.9.peg.1640
- eggNOG:   COG0816
- HOGENOM:   HBG607919
- OMA:   VLILQNY
- PhylomeDB:   Q2RHZ7
- BioCyc:   MTHE264732:MOTH_1640-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 15389; Mature: 15389

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIMGLDVGTKTIGVALSDPLGWTAQGLTTIRRRNLAADLAALKELVRRYGVEELVVGLP
CEEECCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC
RNMNGSLGPQAEAVRAFARHLQAEVGLPVHFFDERLTTVAAGRVLLEADLSRRRRRQVID
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAATYILQGYLDRLGQNGV
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIMGLDVGTKTIGVALSDPLGWTAQGLTTIRRRNLAADLAALKELVRRYGVEELVVGLP
CEEECCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC
RNMNGSLGPQAEAVRAFARHLQAEVGLPVHFFDERLTTVAAGRVLLEADLSRRRRRQVID
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAATYILQGYLDRLGQNGV
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA