| Definition | Moorella thermoacetica ATCC 39073, complete genome. |
|---|---|
| Accession | NC_007644 |
| Length | 2,628,784 |
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The map label for this gene is 83590245
Identifier: 83590245
GI number: 83590245
Start: 1445175
End: 1445990
Strand: Reverse
Name: 83590245
Synonym: Moth_1398
Alternate gene names: NA
Gene position: 1445990-1445175 (Counterclockwise)
Preceding gene: 83590247
Following gene: 83590243
Centisome position: 55.01
GC content: 55.39
Gene sequence:
>816_bases ATGACTTCCTGGAATGGCCGTGTCTTTGTAAGTACATTGCCCCTGACGCGGCCGCTGGATATCAAAACTTTACTGGCCTC CGGTGCCGGCCTGGAGATCTTTGCCGAAGGACCCCAGTGGCGAGACCCGGAAAACGGCCTCAACCTCACCAGGACCCTCC TGCGGGGGTATAATAATCCCCGGAGTCTCCACGCCCCCTTTTACGACCTTAACCTGGCCTCGGAAAAATACCCGCCCATC CGGGATTTGACCCTGGATATCTATAAAAGATTCTTTGGAGTAGCTGCCGAACTGGAGTGCGAACATGTTGTCATCCATAC CCATGCCTATACCTGTCCCCTTTATGATCCGGCCGGGACCCGCCAGCGGGTAAAAAACATCCTGCCTTTACTGGCGGCAA GCGCCCGGCAGGCCGGGATAAGGCTGGCAGTAGAAAACATCGGCCTGGGCCCTACCCAGCTATTCGATTCCGAGGAATAC GTTAATCTTTTCCGGGAGATCGACGGAATCTTTGCCCTCCTGGATATTGGCCATGCCTTCCTGAACGGCTGGGACATACC CCGGGTGATCTGGCAGCTAGGAGAAAAACTGGTGGCTTTGCACCTCCATGATAACCGGGGGCACGCTGACGAGCATTTGC CCATAGGGATGGGAAGCATTAATTGGCGGCTTATCCGGGAAGCCCTGGCCCTGTTGCCCTCGCCGCCGGCCTTAATCCTG GAATATAACGAAGAAACGCGTTTAAACCGGATCTTGACCGATATCCATGAACTCCAGTGTACCCACCGGTTCGGTTCAGC TATGGGCCAGGTTTAA
Upstream 100 bases:
>100_bases AGGTTTAACAGGAAATTAACCGGCCCTTAGCAGTATATTTATAAACCGGTAGTAAAATCGAAGGTAAGAGTTAACCTGTA CCCGGGGGGAGGATCTACCC
Downstream 100 bases:
>100_bases CTGCATACTAGCTGTAGCGGGGAGGCCAATGATTATCAACTTCTATAGCCAGGACCGGGAAGGCCGGAGGACGTGGCTAC CCCTGGTCTCCGTTTCTCTG
Product: xylose isomerase-like TIM barrel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTSWNGRVFVSTLPLTRPLDIKTLLASGAGLEIFAEGPQWRDPENGLNLTRTLLRGYNNPRSLHAPFYDLNLASEKYPPI RDLTLDIYKRFFGVAAELECEHVVIHTHAYTCPLYDPAGTRQRVKNILPLLAASARQAGIRLAVENIGLGPTQLFDSEEY VNLFREIDGIFALLDIGHAFLNGWDIPRVIWQLGEKLVALHLHDNRGHADEHLPIGMGSINWRLIREALALLPSPPALIL EYNEETRLNRILTDIHELQCTHRFGSAMGQV
Sequences:
>Translated_271_residues MTSWNGRVFVSTLPLTRPLDIKTLLASGAGLEIFAEGPQWRDPENGLNLTRTLLRGYNNPRSLHAPFYDLNLASEKYPPI RDLTLDIYKRFFGVAAELECEHVVIHTHAYTCPLYDPAGTRQRVKNILPLLAASARQAGIRLAVENIGLGPTQLFDSEEY VNLFREIDGIFALLDIGHAFLNGWDIPRVIWQLGEKLVALHLHDNRGHADEHLPIGMGSINWRLIREALALLPSPPALIL EYNEETRLNRILTDIHELQCTHRFGSAMGQV >Mature_270_residues TSWNGRVFVSTLPLTRPLDIKTLLASGAGLEIFAEGPQWRDPENGLNLTRTLLRGYNNPRSLHAPFYDLNLASEKYPPIR DLTLDIYKRFFGVAAELECEHVVIHTHAYTCPLYDPAGTRQRVKNILPLLAASARQAGIRLAVENIGLGPTQLFDSEEYV NLFREIDGIFALLDIGHAFLNGWDIPRVIWQLGEKLVALHLHDNRGHADEHLPIGMGSINWRLIREALALLPSPPALILE YNEETRLNRILTDIHELQCTHRFGSAMGQV
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1311 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001719 - InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 30539; Mature: 30408
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSWNGRVFVSTLPLTRPLDIKTLLASGAGLEIFAEGPQWRDPENGLNLTRTLLRGYNNP CCCCCCEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCC RSLHAPFYDLNLASEKYPPIRDLTLDIYKRFFGVAAELECEHVVIHTHAYTCPLYDPAGT CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCEEEEEEEEEECCCCCCCCH RQRVKNILPLLAASARQAGIRLAVENIGLGPTQLFDSEEYVNLFREIDGIFALLDIGHAF HHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LNGWDIPRVIWQLGEKLVALHLHDNRGHADEHLPIGMGSINWRLIREALALLPSPPALIL HCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE EYNEETRLNRILTDIHELQCTHRFGSAMGQV EECCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSWNGRVFVSTLPLTRPLDIKTLLASGAGLEIFAEGPQWRDPENGLNLTRTLLRGYNNP CCCCCEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCC RSLHAPFYDLNLASEKYPPIRDLTLDIYKRFFGVAAELECEHVVIHTHAYTCPLYDPAGT CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCEEEEEEEEEECCCCCCCCH RQRVKNILPLLAASARQAGIRLAVENIGLGPTQLFDSEEYVNLFREIDGIFALLDIGHAF HHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LNGWDIPRVIWQLGEKLVALHLHDNRGHADEHLPIGMGSINWRLIREALALLPSPPALIL HCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE EYNEETRLNRILTDIHELQCTHRFGSAMGQV EECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]