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The map label for this gene is 83590240

Identifier: 83590240

GI number: 83590240

Start: 1441357

End: 1441764

Strand: Reverse

Name: 83590240

Synonym: Moth_1393

Alternate gene names: NA

Gene position: 1441764-1441357 (Counterclockwise)

Preceding gene: 83590241

Following gene: 83590237

Centisome position: 54.85

GC content: 43.63

Gene sequence:

>408_bases
GTGAAAGAAGAAATTAAACAGTTAATCCTATACAGGATGGAACGCGCTAAAGAAGCTATAGCCGAGGCGGAATTGCTTTT
TTCGGAAGGCCATATACGTACTTCCGTTAACCGGTTATATTATGCCTGTTTCTACGCCGTTTCTGCCATTCTCCTTGCCA
AGGGTTACTCGTCAGCCAAACATTCAGGTATCCGTTCACTTTTCCACCAGAAGATCGTTAAAGCTGGTTTGGTTAACCCT
TCGGCCGGAACATTATATAACAGGCTGTTTGATGCCCGCCAGAAAGCTGATTATGCCGACCTGGTTAAATTTGAAGCCGA
TATTGTTGCTCCCTGGTTTGATGAAGTAAAATCTCTTGTCCATCAGATTGAAACTCTTGTGGTTAAAGAGATTCGCAGTC
CTGGTTGA

Upstream 100 bases:

>100_bases
TAGCTTTATCTATAGCGGTTTTTAGCGAACAGGAGTGGAATTCCCCTCTATACCAGGCCATGCCTTTCACCCAGAACGTA
AAACGTGAGGGGATAGTTCT

Downstream 100 bases:

>100_bases
TCTATCGAGCTGGAGAAAGTAAATGAATTGCAGCAAAGCACCCGGCAGGGAACCCTGCCGGGCATTTTTTTCGCCACAGG
GCTCTGGCTCCGGCCAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKEEIKQLILYRMERAKEAIAEAELLFSEGHIRTSVNRLYYACFYAVSAILLAKGYSSAKHSGIRSLFHQKIVKAGLVNP
SAGTLYNRLFDARQKADYADLVKFEADIVAPWFDEVKSLVHQIETLVVKEIRSPG

Sequences:

>Translated_135_residues
MKEEIKQLILYRMERAKEAIAEAELLFSEGHIRTSVNRLYYACFYAVSAILLAKGYSSAKHSGIRSLFHQKIVKAGLVNP
SAGTLYNRLFDARQKADYADLVKFEADIVAPWFDEVKSLVHQIETLVVKEIRSPG
>Mature_135_residues
MKEEIKQLILYRMERAKEAIAEAELLFSEGHIRTSVNRLYYACFYAVSAILLAKGYSSAKHSGIRSLFHQKIVKAGLVNP
SAGTLYNRLFDARQKADYADLVKFEADIVAPWFDEVKSLVHQIETLVVKEIRSPG

Specific function: Unknown

COG id: COG1895

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0332 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007842 [H]

Pfam domain/function: PF05168 HEPN [H]

EC number: NA

Molecular weight: Translated: 15306; Mature: 15306

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEIKQLILYRMERAKEAIAEAELLFSEGHIRTSVNRLYYACFYAVSAILLAKGYSSAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
HSGIRSLFHQKIVKAGLVNPSAGTLYNRLFDARQKADYADLVKFEADIVAPWFDEVKSLV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH
HQIETLVVKEIRSPG
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MKEEIKQLILYRMERAKEAIAEAELLFSEGHIRTSVNRLYYACFYAVSAILLAKGYSSAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
HSGIRSLFHQKIVKAGLVNPSAGTLYNRLFDARQKADYADLVKFEADIVAPWFDEVKSLV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH
HQIETLVVKEIRSPG
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]