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The map label for this gene is lldR [H]

Identifier: 83590157

GI number: 83590157

Start: 1354361

End: 1355110

Strand: Reverse

Name: lldR [H]

Synonym: Moth_1310

Alternate gene names: 83590157

Gene position: 1355110-1354361 (Counterclockwise)

Preceding gene: 83590158

Following gene: 83590156

Centisome position: 51.55

GC content: 59.33

Gene sequence:

>750_bases
ATGACCGTGCGTGACCCATCGACAGAAAGACTTTTTCAACCTATCAACCGCAACCCGAAGAGCGTTTATAACCGGGTGGT
AGATGAAATAAAGAAGAGCATCTTTGAAGGCAAGATGAGCCCCGGCGACCGCCTGCCGGCGGAGCGGGAACTGGCCGAGA
TGCTGGGGGTAAGCCGGACCTCCGTCCGAGAGGCTTTAAAAATGCTGGCCGCCGAAGGCCTGGTGAGCATCCGCCACGGC
CAGGGTGCCTTTATCAGCGAGCAGGACCCGGATGAATACTTAAAGCGCTTTGCCAGTCACCTGCCGGTAAACCGGGAAAC
CGTCCTTGATCTCTTTGAGGTCCGCGAGGTCCTTGAGCCCCAGGCAGCTCGCTGGGTGGCTGAGAGGGGTACCCAGGGTG
ATATACAGGAATTGGCTTCTATGGTTATAACTACCAAAGAACAACTGGGGCGGCTGCGAAGCGGTCGCCTTTCCCTCCTG
GCCGGGCACGACAGCAACTTCCATTACCGCCTGGCCCAGGCTGCCGGCAATATTGTTCTGGTAAGGTTGATGCATAGCCT
TCTGGGTCTCCTGGCCGACAGTCGCTCCCGCAGCCTGGCCATACCCGGCCGCGGGGAGCGCTCGGTAGATGAGCACTATG
AAATAGTCCAGGCCCTTCTCCACCGGGACGCCGAAGGGGCGGCTGCCGCCATGTTACGCCACCTGAAAGACGTCAGGGAA
CAGGTAGAGGCTGCCTGGCGGGAGGGTTAA

Upstream 100 bases:

>100_bases
GCCGTTTTGCAAGGCCGCGCCGGGGAGGCTATTTACCCCTTACCCGGGATATGCTACAATTTAGGCTTGAGGTATGACCA
CTTGTCCCCGGGTAGGAGCG

Downstream 100 bases:

>100_bases
CGAAAAAAACTTGACATTGCCAGAACCAGGGTTTATATTTTATACAAGCTGGCTTGAACTTAATAAAGGAATGAAACTCT
TATCGAGAGTGGTGGAGGGA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTVRDPSTERLFQPINRNPKSVYNRVVDEIKKSIFEGKMSPGDRLPAERELAEMLGVSRTSVREALKMLAAEGLVSIRHG
QGAFISEQDPDEYLKRFASHLPVNRETVLDLFEVREVLEPQAARWVAERGTQGDIQELASMVITTKEQLGRLRSGRLSLL
AGHDSNFHYRLAQAAGNIVLVRLMHSLLGLLADSRSRSLAIPGRGERSVDEHYEIVQALLHRDAEGAAAAMLRHLKDVRE
QVEAAWREG

Sequences:

>Translated_249_residues
MTVRDPSTERLFQPINRNPKSVYNRVVDEIKKSIFEGKMSPGDRLPAERELAEMLGVSRTSVREALKMLAAEGLVSIRHG
QGAFISEQDPDEYLKRFASHLPVNRETVLDLFEVREVLEPQAARWVAERGTQGDIQELASMVITTKEQLGRLRSGRLSLL
AGHDSNFHYRLAQAAGNIVLVRLMHSLLGLLADSRSRSLAIPGRGERSVDEHYEIVQALLHRDAEGAAAAMLRHLKDVRE
QVEAAWREG
>Mature_248_residues
TVRDPSTERLFQPINRNPKSVYNRVVDEIKKSIFEGKMSPGDRLPAERELAEMLGVSRTSVREALKMLAAEGLVSIRHGQ
GAFISEQDPDEYLKRFASHLPVNRETVLDLFEVREVLEPQAARWVAERGTQGDIQELASMVITTKEQLGRLRSGRLSLLA
GHDSNFHYRLAQAAGNIVLVRLMHSLLGLLADSRSRSLAIPGRGERSVDEHYEIVQALLHRDAEGAAAAMLRHLKDVREQ
VEAAWREG

Specific function: May be a regulatory protein for the LCT genes [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790032, Length=235, Percent_Identity=32.7659574468085, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1790780, Length=233, Percent_Identity=30.9012875536481, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082208, Length=231, Percent_Identity=29.004329004329, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789353, Length=237, Percent_Identity=29.957805907173, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI48994955, Length=231, Percent_Identity=27.7056277056277, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786303, Length=180, Percent_Identity=31.6666666666667, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789621, Length=266, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994961, Length=227, Percent_Identity=29.5154185022026, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27936; Mature: 27805

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRDPSTERLFQPINRNPKSVYNRVVDEIKKSIFEGKMSPGDRLPAERELAEMLGVSRT
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHH
SVREALKMLAAEGLVSIRHGQGAFISEQDPDEYLKRFASHLPVNRETVLDLFEVREVLEP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCH
QAARWVAERGTQGDIQELASMVITTKEQLGRLRSGRLSLLAGHDSNFHYRLAQAAGNIVL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHH
VRLMHSLLGLLADSRSRSLAIPGRGERSVDEHYEIVQALLHRDAEGAAAAMLRHLKDVRE
HHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QVEAAWREG
HHHHHHCCC
>Mature Secondary Structure 
TVRDPSTERLFQPINRNPKSVYNRVVDEIKKSIFEGKMSPGDRLPAERELAEMLGVSRT
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHH
SVREALKMLAAEGLVSIRHGQGAFISEQDPDEYLKRFASHLPVNRETVLDLFEVREVLEP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCH
QAARWVAERGTQGDIQELASMVITTKEQLGRLRSGRLSLLAGHDSNFHYRLAQAAGNIVL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHH
VRLMHSLLGLLADSRSRSLAIPGRGERSVDEHYEIVQALLHRDAEGAAAAMLRHLKDVRE
HHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QVEAAWREG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407843; 8041620; 9278503 [H]