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The map label for this gene is ybbM [C]

Identifier: 83590019

GI number: 83590019

Start: 1202980

End: 1203765

Strand: Reverse

Name: ybbM [C]

Synonym: Moth_1171

Alternate gene names: 83590019

Gene position: 1203765-1202980 (Counterclockwise)

Preceding gene: 83590020

Following gene: 83590018

Centisome position: 45.79

GC content: 55.85

Gene sequence:

>786_bases
ATGCAGTATATCAATATCGGCCTTGGTGATATAGGTCTGGCCCTGATGCTGGTAGGGATCACCCTGGCTGTTTCTTTGTG
GCAGCGCCTGGACCTTCACAGAGATCTATTTATCGGCACCCTCAGAACATTTATCCAGCTAACGGCCGTCGGTTACCTGC
TGCAGGTGATTTTTAACCTAGATCGCTGGTACCTGGTCGTCCTGGCTTTAGGTATCATGTTACTGGTGGCTGCCGCCAAC
GCCTTTCACCGGCAACAGGAGCGCTGGCCCGAGTTATTCGTCATTATGCTCTTGGCCATAGCACTGGGCGGGATTATAAC
CCTGGCCATTGTCATTGGCATTGTTTTAAAGGTAAAACCCTGGTATCAGCCCCAATATATTATTCCTATCGCCGGGATGA
TTGTTGGCAACGCCATGATCGGTGCCGCCCTGGCCATCAACCGTTTAACAGGGGAGATCAATGCCCACCGGGAGGAGATC
GAGGCGGCCCTGTCCCTGGGGGCGACTGCCTACCTGGCAGTCCTGCCTTACCTGCGTTCGGCCCTGCGAGCGGCCATGTT
ACCGACCATCAGCACTATGATGACGGTGGGTATTGTCCAGTTGCCAGGAATGATGAGCGGTCAGATCATTGCCGGTGCCA
GCCCGGCGGCAGCTGTCAGGTACCAGGTCGTCGTCACTTATATGGTTGCCGCCGCTACGGCCCTGACTACCATTACCGCC
ACCCTGCTGGCCTACCGCTATTACTTTACGCCCAACCACCAGCTGAAACCGCCGTCCCAGCGCTGA

Upstream 100 bases:

>100_bases
GCGGCGAAATAGTCGAAACAGCTCCGGCCCAACAGTTTTTTACTGCTCCGCGGGACCCCCGCAGCAGGCTCTTCCTGTCC
GGGGAGTTGGAGGGATAAGG

Downstream 100 bases:

>100_bases
CGATTTCCAGTTTGATACCTCATTCGTCAGCAGGGGAGAGGGCACCATCGCCGTCCGTGATATGGACTACCACCTCACAC
ATCCCATTTCGGGGAGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MQYINIGLGDIGLALMLVGITLAVSLWQRLDLHRDLFIGTLRTFIQLTAVGYLLQVIFNLDRWYLVVLALGIMLLVAAAN
AFHRQQERWPELFVIMLLAIALGGIITLAIVIGIVLKVKPWYQPQYIIPIAGMIVGNAMIGAALAINRLTGEINAHREEI
EAALSLGATAYLAVLPYLRSALRAAMLPTISTMMTVGIVQLPGMMSGQIIAGASPAAAVRYQVVVTYMVAAATALTTITA
TLLAYRYYFTPNHQLKPPSQR

Sequences:

>Translated_261_residues
MQYINIGLGDIGLALMLVGITLAVSLWQRLDLHRDLFIGTLRTFIQLTAVGYLLQVIFNLDRWYLVVLALGIMLLVAAAN
AFHRQQERWPELFVIMLLAIALGGIITLAIVIGIVLKVKPWYQPQYIIPIAGMIVGNAMIGAALAINRLTGEINAHREEI
EAALSLGATAYLAVLPYLRSALRAAMLPTISTMMTVGIVQLPGMMSGQIIAGASPAAAVRYQVVVTYMVAAATALTTITA
TLLAYRYYFTPNHQLKPPSQR
>Mature_261_residues
MQYINIGLGDIGLALMLVGITLAVSLWQRLDLHRDLFIGTLRTFIQLTAVGYLLQVIFNLDRWYLVVLALGIMLLVAAAN
AFHRQQERWPELFVIMLLAIALGGIITLAIVIGIVLKVKPWYQPQYIIPIAGMIVGNAMIGAALAINRLTGEINAHREEI
EAALSLGATAYLAVLPYLRSALRAAMLPTISTMMTVGIVQLPGMMSGQIIAGASPAAAVRYQVVVTYMVAAATALTTITA
TLLAYRYYFTPNHQLKPPSQR

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=255, Percent_Identity=39.2156862745098, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28446; Mature: 28446

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYINIGLGDIGLALMLVGITLAVSLWQRLDLHRDLFIGTLRTFIQLTAVGYLLQVIFNL
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRWYLVVLALGIMLLVAAANAFHRQQERWPELFVIMLLAIALGGIITLAIVIGIVLKVKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WYQPQYIIPIAGMIVGNAMIGAALAINRLTGEINAHREEIEAALSLGATAYLAVLPYLRS
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRAAMLPTISTMMTVGIVQLPGMMSGQIIAGASPAAAVRYQVVVTYMVAAATALTTITA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLLAYRYYFTPNHQLKPPSQR
HHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MQYINIGLGDIGLALMLVGITLAVSLWQRLDLHRDLFIGTLRTFIQLTAVGYLLQVIFNL
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRWYLVVLALGIMLLVAAANAFHRQQERWPELFVIMLLAIALGGIITLAIVIGIVLKVKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WYQPQYIIPIAGMIVGNAMIGAALAINRLTGEINAHREEIEAALSLGATAYLAVLPYLRS
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRAAMLPTISTMMTVGIVQLPGMMSGQIIAGASPAAAVRYQVVVTYMVAAATALTTITA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLLAYRYYFTPNHQLKPPSQR
HHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]