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The map label for this gene is ydeP [H]

Identifier: 83589241

GI number: 83589241

Start: 378093

End: 378464

Strand: Reverse

Name: ydeP [H]

Synonym: Moth_0373

Alternate gene names: 83589241

Gene position: 378464-378093 (Counterclockwise)

Preceding gene: 83589270

Following gene: 83589238

Centisome position: 14.4

GC content: 43.82

Gene sequence:

>372_bases
ATGGCTAAAGTACAGAACCGGGAAGAAATCTGTCCCGTAACGGCTGTGCAACGGTTAATTGCAGGTAAATGGAAAATTGT
TATTCTATGGCATCTGAGTCATAAAACCCGGAGATTCAACGAGCTACAAAAGCTCTTGCCAGAAGTATCCCGGGGAGTAC
TTACGCAACAGCTAAGGGATCTTGAACGGGATGGACTTGTACATAGGGAAGTATATAAGGAAGTACCTCCAAAAGTCGAA
TACTCCTTAACGGAAATTGGCCAAAGTTTTATACCTGTATTGGATGTTATTGCTAAATGGGGTAAATACTATATAAATAA
TACGCGCTTGTCCCCAGGGCCGGACTTGGCACGTACAGGATCCGCAGACTGA

Upstream 100 bases:

>100_bases
AAAGCCTAATAAGATACTATAGTAAAAAGCACACCTTTACAAGTACGCACATTTTTATTACATAGGCATAAAAAACGTAC
CATAAAGGGGGTCCTTTTTG

Downstream 100 bases:

>100_bases
GAAGATTAGAGAACCCCTCCCCATCCTTCAAATGTCCGGTATTTCAGCTCGCGGTAAAGTTCCTGAGCGGCTTATCTACC
AAGGGGCTCAATCTCATTAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAKVQNREEICPVTAVQRLIAGKWKIVILWHLSHKTRRFNELQKLLPEVSRGVLTQQLRDLERDGLVHREVYKEVPPKVE
YSLTEIGQSFIPVLDVIAKWGKYYINNTRLSPGPDLARTGSAD

Sequences:

>Translated_123_residues
MAKVQNREEICPVTAVQRLIAGKWKIVILWHLSHKTRRFNELQKLLPEVSRGVLTQQLRDLERDGLVHREVYKEVPPKVE
YSLTEIGQSFIPVLDVIAKWGKYYINNTRLSPGPDLARTGSAD
>Mature_122_residues
AKVQNREEICPVTAVQRLIAGKWKIVILWHLSHKTRRFNELQKLLPEVSRGVLTQQLRDLERDGLVHREVYKEVPPKVEY
SLTEIGQSFIPVLDVIAKWGKYYINNTRLSPGPDLARTGSAD

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=92, Percent_Identity=38.0434782608696, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14162; Mature: 14030

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVQNREEICPVTAVQRLIAGKWKIVILWHLSHKTRRFNELQKLLPEVSRGVLTQQLRD
CCCCCCCHHCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERDGLVHREVYKEVPPKVEYSLTEIGQSFIPVLDVIAKWGKYYINNTRLSPGPDLARTG
HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SAD
CCC
>Mature Secondary Structure 
AKVQNREEICPVTAVQRLIAGKWKIVILWHLSHKTRRFNELQKLLPEVSRGVLTQQLRD
CCCCCCHHCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERDGLVHREVYKEVPPKVEYSLTEIGQSFIPVLDVIAKWGKYYINNTRLSPGPDLARTG
HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SAD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]