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The map label for this gene is ycjC [C]

Identifier: 83589152

GI number: 83589152

Start: 290061

End: 290366

Strand: Reverse

Name: ycjC [C]

Synonym: Moth_0284

Alternate gene names: 83589152

Gene position: 290366-290061 (Counterclockwise)

Preceding gene: 83589157

Following gene: 83589149

Centisome position: 11.05

GC content: 45.42

Gene sequence:

>306_bases
ATGACTTTAGGAAATAGACTCAAAGAGCTTCGGGAGAAACATCACCTTACTCAATATCGCCTGGCAAAACTTTCTGGTGT
GTCTCAGTCACATATTAGCGAAATCGAATCAGGTGATAAAGAACCCACAACCGGGACGCTCATGAAAATCTGCTCCGCTA
TGGGGCTTACTCTCGCTGAATTCTTTACGGAAGAAACCCCTTCTCTCCCTCCTGATCTCCGACAGATCCTTAAGGAAGCT
GAAAGCCTCACGCCAGGGCAGCGGCAGAAGTTAATTGAATTCCTTAAAAGCATAAAGAGCAATTAG

Upstream 100 bases:

>100_bases
AACTTATTATTGTCAATTCCTATCGCGATATATTTTGAGCTTTTCTCCTACTTATTTTTTTGATACAATCGCTAAAGAGA
TAATTTAAAGGGAGATAAAA

Downstream 100 bases:

>100_bases
GGGCTGCTTTTAAGTAAATAAATTGCTATTTCCTCCAGCCCCTCATGGGCGCAGCTAACCCCGAGGGGTTTTTGCCCGAA
ATTTTTGTCCTCCCCCTCTA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein; Prophage Repressor

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTLGNRLKELREKHHLTQYRLAKLSGVSQSHISEIESGDKEPTTGTLMKICSAMGLTLAEFFTEETPSLPPDLRQILKEA
ESLTPGQRQKLIEFLKSIKSN

Sequences:

>Translated_101_residues
MTLGNRLKELREKHHLTQYRLAKLSGVSQSHISEIESGDKEPTTGTLMKICSAMGLTLAEFFTEETPSLPPDLRQILKEA
ESLTPGQRQKLIEFLKSIKSN
>Mature_100_residues
TLGNRLKELREKHHLTQYRLAKLSGVSQSHISEIESGDKEPTTGTLMKICSAMGLTLAEFFTEETPSLPPDLRQILKEAE
SLTPGQRQKLIEFLKSIKSN

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11353; Mature: 11222

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGNRLKELREKHHLTQYRLAKLSGVSQSHISEIESGDKEPTTGTLMKICSAMGLTLAE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FFTEETPSLPPDLRQILKEAESLTPGQRQKLIEFLKSIKSN
HHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLGNRLKELREKHHLTQYRLAKLSGVSQSHISEIESGDKEPTTGTLMKICSAMGLTLAE
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
FFTEETPSLPPDLRQILKEAESLTPGQRQKLIEFLKSIKSN
HHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA