Click here to switch to the map view.

The map label for this gene is immR [H]

Identifier: 83589146

GI number: 83589146

Start: 287262

End: 287648

Strand: Reverse

Name: immR [H]

Synonym: Moth_0278

Alternate gene names: 83589146

Gene position: 287648-287262 (Counterclockwise)

Preceding gene: 83589149

Following gene: 83589145

Centisome position: 10.94

GC content: 43.15

Gene sequence:

>387_bases
ATGTCAATTGGAAAGCGAATTAAGGAATTACGTGAAAAGATTGGTTTAACTCAAGAGGAACTAGCTGAACGGGTACAAAT
TAGCCGTTCGGCATTAGCTAATTACGAGAGTGGGTACCGGGAACCGAAAGGAGAGATACTGGTAAGGTTTGCCAAAGCCC
TAAACACCTCCACCGATTTTCTTCTTGGTAACGAAGTTAAGGTTGATAAGACCAATGATAAGACCAAGAAGTATGAACTT
GACGAAGCCACCCTCCTCTTTGCCCGCCTCAGTAATCTAACCCCTGAAGGACGGGAGAAGGTACTGCGTGAACTGGAATG
GATCGAAGAGCTTGAACGAAAAAGGTTCCTTGAAAGAAAGAAAAAGCAAAATCAGGAAAAGAATTAG

Upstream 100 bases:

>100_bases
CTCGCTTTTTCTCGTTTATGCTTAGTTATTCTATGTCACATAAAGAAACTTTAAAATGCCACATATTGTGGTAAAATAAT
ATTGTGGAGGGTATGGTAAA

Downstream 100 bases:

>100_bases
CTGCCAGGACATGGCAGCTTTTCTTTTTCGACATTCTTCGACTTATTTTGTTGGGAGGCCATTATGAGTTTAGCCGAAGC
CAAAGCCAGGCTCCTGATCA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKALNTSTDFLLGNEVKVDKTNDKTKKYEL
DEATLLFARLSNLTPEGREKVLRELEWIEELERKRFLERKKKQNQEKN

Sequences:

>Translated_128_residues
MSIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKALNTSTDFLLGNEVKVDKTNDKTKKYEL
DEATLLFARLSNLTPEGREKVLRELEWIEELERKRFLERKKKQNQEKN
>Mature_127_residues
SIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKALNTSTDFLLGNEVKVDKTNDKTKKYELD
EATLLFARLSNLTPEGREKVLRELEWIEELERKRFLERKKKQNQEKN

Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15055; Mature: 14924

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKALNTSTDF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
LLGNEVKVDKTNDKTKKYELDEATLLFARLSNLTPEGREKVLRELEWIEELERKRFLERK
EECCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKQNQEKN
HHHCCCCC
>Mature Secondary Structure 
SIGKRIKELREKIGLTQEELAERVQISRSALANYESGYREPKGEILVRFAKALNTSTDF
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
LLGNEVKVDKTNDKTKKYELDEATLLFARLSNLTPEGREKVLRELEWIEELERKRFLERK
EECCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKQNQEKN
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]