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The map label for this gene is yjnA [H]

Identifier: 83313505

GI number: 83313505

Start: 4809715

End: 4810668

Strand: Reverse

Name: yjnA [H]

Synonym: amb4406

Alternate gene names: 83313505

Gene position: 4810668-4809715 (Counterclockwise)

Preceding gene: 83313506

Following gene: 83313504

Centisome position: 96.85

GC content: 64.36

Gene sequence:

>954_bases
GTGCATGGGGCAGAGGGGGCGGAAGGAATGCAGATCTACCTTCCCATCGCCGAGATGTCGGTGAATGTCTTCGTTATCCT
GGGCCTGGGTGGCGGGGTGGGGTTCATGTCGGGCCTGTTCGGAGTCGGCGGCGGATTCCTGATGACGCCGCTGCTGATCT
TCCTGGGCGTGCCGCCCACCGTGGCGGTGGGGACCGAGGCCAACCAGATCGTCGCGTCGTCGGTGTCCGGCGTTCTCGCC
CATTGGCGGCGCGGCAATGTCGACGTCAAGATGGGCCTGATCCTGACCCTGGGCGGCTTCGTCGGCTCGACGCTGGGCGT
TTATGTCTTCAAGTGGCTACGCGGTCTGGGCCAGATCGATCTGGTCATCTCGCTGCTCTACATCGTCTTTCTCGGCATCG
TCGGTTCGCTGATGCTGGTGGAAAGCATCCAGGCGCTGGTGGCCAGCAAGCGCAACGGCGGTAACGTTCCGGTGCGCAAG
AAGCACCAGCACAGCTGGATGCACGGCCTGCCGTTCAAGATGCGCTTTCGCCGTTCGCAGCTCTATATCAGCGCCATCGT
TCCCGCCGCCATCGGCCTGCTGGTCGGCATCCTGGCCGCCCTGATGGGCGTGGGCGGCGGCTTCATCATGGTGCCGGCCA
TGATCTATCTGCTGGGCATGCCCACGGCGGTGGTGGTGGGCACCTCGCTGTTCCAGATCATCTTCGTCACCGCCAATGCC
ACCTTTTTGCAATCGACCATGAACCACACGGTGGACGTGGTTCTGGCCCTGCTGCTGCTGCTGGGCGGCGTGATCGGCGC
CCAGGTCGGCGCCCGCTTCGGCGTCAAGCTGAAGGGCGAGCAATTGCGGTCGCTGCTGGCCTTGATGGTGCTGGGCGTGT
GCGTCAAGCTGCTCTTCGACATGGTCACGGTGCCGGGCGAATTGTTCGCCGCCGGGACGGGAGGGAAGCACTGA

Upstream 100 bases:

>100_bases
CAACCCGGGAAGACAGAACATTAGAAAACCATAAAATTCCTGTTGCCATCGCCCCCTGGTTGGAGCGACAACCAAAGAGC
CCCGTAAGCACCGGTTGAGA

Downstream 100 bases:

>100_bases
TGAAACGCCTGCTTCTTCTTCTCGTCCTGCTGATCCCGGCTCCGTCCGCCTGGGCGGTGGAGCCGCTGGTGGCGGATCTG
TCCAAGCATCTGGTGGCCAT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MHGAEGAEGMQIYLPIAEMSVNVFVILGLGGGVGFMSGLFGVGGGFLMTPLLIFLGVPPTVAVGTEANQIVASSVSGVLA
HWRRGNVDVKMGLILTLGGFVGSTLGVYVFKWLRGLGQIDLVISLLYIVFLGIVGSLMLVESIQALVASKRNGGNVPVRK
KHQHSWMHGLPFKMRFRRSQLYISAIVPAAIGLLVGILAALMGVGGGFIMVPAMIYLLGMPTAVVVGTSLFQIIFVTANA
TFLQSTMNHTVDVVLALLLLLGGVIGAQVGARFGVKLKGEQLRSLLALMVLGVCVKLLFDMVTVPGELFAAGTGGKH

Sequences:

>Translated_317_residues
MHGAEGAEGMQIYLPIAEMSVNVFVILGLGGGVGFMSGLFGVGGGFLMTPLLIFLGVPPTVAVGTEANQIVASSVSGVLA
HWRRGNVDVKMGLILTLGGFVGSTLGVYVFKWLRGLGQIDLVISLLYIVFLGIVGSLMLVESIQALVASKRNGGNVPVRK
KHQHSWMHGLPFKMRFRRSQLYISAIVPAAIGLLVGILAALMGVGGGFIMVPAMIYLLGMPTAVVVGTSLFQIIFVTANA
TFLQSTMNHTVDVVLALLLLLGGVIGAQVGARFGVKLKGEQLRSLLALMVLGVCVKLLFDMVTVPGELFAAGTGGKH
>Mature_317_residues
MHGAEGAEGMQIYLPIAEMSVNVFVILGLGGGVGFMSGLFGVGGGFLMTPLLIFLGVPPTVAVGTEANQIVASSVSGVLA
HWRRGNVDVKMGLILTLGGFVGSTLGVYVFKWLRGLGQIDLVISLLYIVFLGIVGSLMLVESIQALVASKRNGGNVPVRK
KHQHSWMHGLPFKMRFRRSQLYISAIVPAAIGLLVGILAALMGVGGGFIMVPAMIYLLGMPTAVVVGTSLFQIIFVTANA
TFLQSTMNHTVDVVLALLLLLGGVIGAQVGARFGVKLKGEQLRSLLALMVLGVCVKLLFDMVTVPGELFAAGTGGKH

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 33214; Mature: 33214

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGAEGAEGMQIYLPIAEMSVNVFVILGLGGGVGFMSGLFGVGGGFLMTPLLIFLGVPPT
CCCCCCCCCCEEEEEHHHCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
VAVGTEANQIVASSVSGVLAHWRRGNVDVKMGLILTLGGFVGSTLGVYVFKWLRGLGQID
EEECCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LVISLLYIVFLGIVGSLMLVESIQALVASKRNGGNVPVRKKHQHSWMHGLPFKMRFRRSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
LYISAIVPAAIGLLVGILAALMGVGGGFIMVPAMIYLLGMPTAVVVGTSLFQIIFVTANA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH
TFLQSTMNHTVDVVLALLLLLGGVIGAQVGARFGVKLKGEQLRSLLALMVLGVCVKLLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHH
MVTVPGELFAAGTGGKH
HHHCCCHHEECCCCCCC
>Mature Secondary Structure
MHGAEGAEGMQIYLPIAEMSVNVFVILGLGGGVGFMSGLFGVGGGFLMTPLLIFLGVPPT
CCCCCCCCCCEEEEEHHHCCEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
VAVGTEANQIVASSVSGVLAHWRRGNVDVKMGLILTLGGFVGSTLGVYVFKWLRGLGQID
EEECCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LVISLLYIVFLGIVGSLMLVESIQALVASKRNGGNVPVRKKHQHSWMHGLPFKMRFRRSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
LYISAIVPAAIGLLVGILAALMGVGGGFIMVPAMIYLLGMPTAVVVGTSLFQIIFVTANA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH
TFLQSTMNHTVDVVLALLLLLGGVIGAQVGARFGVKLKGEQLRSLLALMVLGVCVKLLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHH
MVTVPGELFAAGTGGKH
HHHCCCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]