Click here to switch to the map view.

The map label for this gene is yhbJ [C]

Identifier: 83313495

GI number: 83313495

Start: 4798261

End: 4799181

Strand: Reverse

Name: yhbJ [C]

Synonym: amb4396

Alternate gene names: 83313495

Gene position: 4799181-4798261 (Counterclockwise)

Preceding gene: 83313496

Following gene: 83313494

Centisome position: 96.62

GC content: 69.92

Gene sequence:

>921_bases
ATGAGCGACCTGCACTCCAGCCCGACGGATCAGACCTCGGCTCCGGCCCATGCCGGGGGCGGCAACCGCGTGGTCATCGT
CACCGGCATGTCCGGCGCCGGCAAGACCATGGCGCTGAAGGCCCTGGAGGACATGGGCTGGGAGGCGGTGGACAACCTGC
CGCTGGCCCTGGCGGCCAGTCTGGTGCGCTCCGGCGGCGGCATGGCCCGTCCCCTGGCGCTGGGCGTCGATATCCGCACC
CGCGATTTCGGCGTCGAGCCGGTGCTGGCGGCCCTGGACCATCTGATGGGCGAAAGCGGCCTGGACGTGCGGCTGCTGTT
CCTGGATTGCGAGGACGACGTGCTGTGCCGCCGCTTCACCGAGACGCGGCGGCGCCATCCCATGGCGGTGGACCGCCCGC
TGCTGGACGGTATCCGCCACGAGCGCGCCCTGGTGTCGCCGCTCAAGCGCCGGGCCGACGTGATGATCGACACCACCAAC
CAGCCGCCCGGCGAGTTCAAGCGCCTGCTGGCCGGGCATTTCGGGCTGGAGAGCAATGGCGGCCTGGGCGTGTTCGTCAC
CTCCTTCGCCTATCGCAACGGCTTGCCGCGCGAGGCCGATCTGGTGTTCGACGCCCGCTTCCTGGCCAATCCCCATTATG
TGCCCGAGCTGAAGCCGCTGACCGGCCGCGATCCGGCGGTGGCCCAATACGTGGCCGCCGACCCAGCCTTCGGGCCGTTC
ATCGAGTCGCTGACCCGCCTGCTGGAGCCGCTGCTGCCGCGCTTCGCCGCCGAGGGCAAGAGCTATCTCACCATTGCCGT
CGGCTGTACCGGCGGCCGTCACCGGTCCGTCGCCATCGCCGAGCACCTAGCGCAGTGGATGCAACGACGGGGCGGAAAGG
TCGAGCTTCGCCATCGCGAACTCGACGAACGGGGTTCATGA

Upstream 100 bases:

>100_bases
TGACCCTGCGCCATCTGCTGCTGGCCCCCTTCGAGGCATCGGCGGCGGCGAAGGTTCGCCTTGCGATGCGCGCTTCAACG
CGAGATATAATGCCGCCGTG

Downstream 100 bases:

>100_bases
TGTCACTGTGCAAGACGCGCGGGATCGGGGCCGGTGGGGCTGGCCTTTTGCCCGTTCAAGGGGGATTGAGATGATCGGAC
TGGTACTCGTCACCCACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSDLHSSPTDQTSAPAHAGGGNRVVIVTGMSGAGKTMALKALEDMGWEAVDNLPLALAASLVRSGGGMARPLALGVDIRT
RDFGVEPVLAALDHLMGESGLDVRLLFLDCEDDVLCRRFTETRRRHPMAVDRPLLDGIRHERALVSPLKRRADVMIDTTN
QPPGEFKRLLAGHFGLESNGGLGVFVTSFAYRNGLPREADLVFDARFLANPHYVPELKPLTGRDPAVAQYVAADPAFGPF
IESLTRLLEPLLPRFAAEGKSYLTIAVGCTGGRHRSVAIAEHLAQWMQRRGGKVELRHRELDERGS

Sequences:

>Translated_306_residues
MSDLHSSPTDQTSAPAHAGGGNRVVIVTGMSGAGKTMALKALEDMGWEAVDNLPLALAASLVRSGGGMARPLALGVDIRT
RDFGVEPVLAALDHLMGESGLDVRLLFLDCEDDVLCRRFTETRRRHPMAVDRPLLDGIRHERALVSPLKRRADVMIDTTN
QPPGEFKRLLAGHFGLESNGGLGVFVTSFAYRNGLPREADLVFDARFLANPHYVPELKPLTGRDPAVAQYVAADPAFGPF
IESLTRLLEPLLPRFAAEGKSYLTIAVGCTGGRHRSVAIAEHLAQWMQRRGGKVELRHRELDERGS
>Mature_305_residues
SDLHSSPTDQTSAPAHAGGGNRVVIVTGMSGAGKTMALKALEDMGWEAVDNLPLALAASLVRSGGGMARPLALGVDIRTR
DFGVEPVLAALDHLMGESGLDVRLLFLDCEDDVLCRRFTETRRRHPMAVDRPLLDGIRHERALVSPLKRRADVMIDTTNQ
PPGEFKRLLAGHFGLESNGGLGVFVTSFAYRNGLPREADLVFDARFLANPHYVPELKPLTGRDPAVAQYVAADPAFGPFI
ESLTRLLEPLLPRFAAEGKSYLTIAVGCTGGRHRSVAIAEHLAQWMQRRGGKVELRHRELDERGS

Specific function: Displays ATPase and GTPase activities

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family

Homologues:

Organism=Escherichia coli, GI1789598, Length=282, Percent_Identity=39.7163120567376, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4396_MAGSA (Q2VYX5)

Other databases:

- EMBL:   AP007255
- RefSeq:   YP_423759.1
- ProteinModelPortal:   Q2VYX5
- STRING:   Q2VYX5
- GeneID:   3803180
- GenomeReviews:   AP007255_GR
- KEGG:   mag:amb4396
- NMPDR:   fig|342108.5.peg.3951
- eggNOG:   COG1660
- HOGENOM:   HBG289732
- OMA:   GIGCTGG
- PhylomeDB:   Q2VYX5
- ProtClustDB:   PRK05416
- BioCyc:   MMAG342108:AMB4396-MONOMER
- HAMAP:   MF_00636
- InterPro:   IPR005337
- PIRSF:   PIRSF005052

Pfam domain/function: PF03668 ATP_bind_2

EC number: NA

Molecular weight: Translated: 33273; Mature: 33141

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLHSSPTDQTSAPAHAGGGNRVVIVTGMSGAGKTMALKALEDMGWEAVDNLPLALAAS
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHH
LVRSGGGMARPLALGVDIRTRDFGVEPVLAALDHLMGESGLDVRLLFLDCEDDVLCRRFT
HHHCCCCCCCCEEEECEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH
ETRRRHPMAVDRPLLDGIRHERALVSPLKRRADVMIDTTNQPPGEFKRLLAGHFGLESNG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCC
GLGVFVTSFAYRNGLPREADLVFDARFLANPHYVPELKPLTGRDPAVAQYVAADPAFGPF
CEEEEEEHHHHHCCCCCCHHHEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHH
IESLTRLLEPLLPRFAAEGKSYLTIAVGCTGGRHRSVAIAEHLAQWMQRRGGKVELRHRE
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHH
LDERGS
HCCCCC
>Mature Secondary Structure 
SDLHSSPTDQTSAPAHAGGGNRVVIVTGMSGAGKTMALKALEDMGWEAVDNLPLALAAS
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHH
LVRSGGGMARPLALGVDIRTRDFGVEPVLAALDHLMGESGLDVRLLFLDCEDDVLCRRFT
HHHCCCCCCCCEEEECEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH
ETRRRHPMAVDRPLLDGIRHERALVSPLKRRADVMIDTTNQPPGEFKRLLAGHFGLESNG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCC
GLGVFVTSFAYRNGLPREADLVFDARFLANPHYVPELKPLTGRDPAVAQYVAADPAFGPF
CEEEEEEHHHHHCCCCCCHHHEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHH
IESLTRLLEPLLPRFAAEGKSYLTIAVGCTGGRHRSVAIAEHLAQWMQRRGGKVELRHRE
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHH
LDERGS
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA