Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is yoaV [H]

Identifier: 83313484

GI number: 83313484

Start: 4786589

End: 4787482

Strand: Reverse

Name: yoaV [H]

Synonym: amb4385

Alternate gene names: 83313484

Gene position: 4787482-4786589 (Counterclockwise)

Preceding gene: 83313485

Following gene: 83313483

Centisome position: 96.38

GC content: 68.23

Gene sequence:

>894_bases
GTGAGCCCCCAACGCCACACCCATCTGGACGCCTTGGCCATGGCGCTGATGATGGGGCTGTGCGCTCTGTGGGGGCTCAA
TCAGGTGGCGGCCAAGGTGGCCAATGCCGGCATTTCGCCGGTGTTGCAGGCGGGTTTGCGCTCGGCCGGCTCGGTGCTGC
TGCTGCTGGTCTGGTGCCGCTTCCGGGGCGTGCGGCTGTTTGACGCCGACGGTTCCCTGGCCGCCGGGCTGGCGGCGGGC
GCCATGTTCAGCGCCGAATTCGCCCTGATCTATTGGGGGCTGGAATTCACCCCCGCCTCGCGCGCCGTGGTGTTTCTGTA
CACCGCGCCCTTCGTGGTGGCGCTGTGCCTGCATTGGCTGGTCCCCGCCGAGCGTTTGAACCGGATGCAGAGCCTGGGGC
TGATCGCGGCCTTCGGCGGCATCCTGCTGGCCTTCGGCGACAATCTGTCCCTGCCCGATGGCCGGCAGATGATCGGCGAC
GCCATGCTGCTGGCGGCGGCGGTGATGTGGGGCGGCACCACCGTGCTGATCCGCACCTCGCGCCTGTCCTCGGTGCGCCC
CAGCAAGACCCTGTTCTACCAGTTGGGCGTCTCGGCCTTGGTCTTGCCGCCGGCGTCGCTGCTGCTGGGCGAGACGGGGA
TTATCGGCCAGCCCTCCACCCTGGTCTGGGTCTCGCTGGCTGGGCAGATCGTCGTCGTGGCCTTCGCCTCGTACCTGACG
TGGTTCTGGCTGATCTCCCGCTATCCCGCCACCCGGCTGTCGGCGTTTTCATTCCTGACGCCGCTGTTCGGCATGATGTT
CGGGGCATGGCTGCTGGGTGAGCGCATCACCTGGGGTCTGGGCGGCGCCATGGCGCTGGTGGCGGCCGGCATCTGGCTGG
TGAACCGGAAGTAA

Upstream 100 bases:

>100_bases
GCAAGGTGGTGGAGGCGGGCCGCGCCGACGAGTTGTTCAAGGCCCCCAGGACCGCCTACACCCGCGCCCTGATGGCGGCG
GCCTTCGATCTGGAGGTGGC

Downstream 100 bases:

>100_bases
CGGAGGGATCGTCGCTTGGAATGCCGCTTTCAGGTCGGAAAGGCCGTTCCAGGATGAGATCCCTCGCGTTCACTCGGGAT
GACATGATGATTTGGATCAG

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCRFRGVRLFDADGSLAAGLAAG
AMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWLVPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGD
AMLLAAAVMWGGTTVLIRTSRLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT
WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK

Sequences:

>Translated_297_residues
MSPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCRFRGVRLFDADGSLAAGLAAG
AMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWLVPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGD
AMLLAAAVMWGGTTVLIRTSRLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT
WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK
>Mature_296_residues
SPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCRFRGVRLFDADGSLAAGLAAGA
MFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWLVPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGDA
MLLAAAVMWGGTTVLIRTSRLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLTW
FWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31762; Mature: 31631

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCR
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FRGVRLFDADGSLAAGLAAGAMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWL
HCCCEEECCCCCHHHHHHHHHHHHHCEEEEEECCEECCCCCEEEEEEHHHHHHHHHHHHH
VPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGDAMLLAAAVMWGGTTVLIRTS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC
RLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT
HHCCCCCCHHHHHHHCCHHEECCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHEEECC
>Mature Secondary Structure 
SPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCR
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FRGVRLFDADGSLAAGLAAGAMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWL
HCCCEEECCCCCHHHHHHHHHHHHHCEEEEEECCEECCCCCEEEEEEHHHHHHHHHHHHH
VPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGDAMLLAAAVMWGGTTVLIRTS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC
RLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT
HHCCCCCCHHHHHHHCCHHEECCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]