| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yoaV [H]
Identifier: 83313484
GI number: 83313484
Start: 4786589
End: 4787482
Strand: Reverse
Name: yoaV [H]
Synonym: amb4385
Alternate gene names: 83313484
Gene position: 4787482-4786589 (Counterclockwise)
Preceding gene: 83313485
Following gene: 83313483
Centisome position: 96.38
GC content: 68.23
Gene sequence:
>894_bases GTGAGCCCCCAACGCCACACCCATCTGGACGCCTTGGCCATGGCGCTGATGATGGGGCTGTGCGCTCTGTGGGGGCTCAA TCAGGTGGCGGCCAAGGTGGCCAATGCCGGCATTTCGCCGGTGTTGCAGGCGGGTTTGCGCTCGGCCGGCTCGGTGCTGC TGCTGCTGGTCTGGTGCCGCTTCCGGGGCGTGCGGCTGTTTGACGCCGACGGTTCCCTGGCCGCCGGGCTGGCGGCGGGC GCCATGTTCAGCGCCGAATTCGCCCTGATCTATTGGGGGCTGGAATTCACCCCCGCCTCGCGCGCCGTGGTGTTTCTGTA CACCGCGCCCTTCGTGGTGGCGCTGTGCCTGCATTGGCTGGTCCCCGCCGAGCGTTTGAACCGGATGCAGAGCCTGGGGC TGATCGCGGCCTTCGGCGGCATCCTGCTGGCCTTCGGCGACAATCTGTCCCTGCCCGATGGCCGGCAGATGATCGGCGAC GCCATGCTGCTGGCGGCGGCGGTGATGTGGGGCGGCACCACCGTGCTGATCCGCACCTCGCGCCTGTCCTCGGTGCGCCC CAGCAAGACCCTGTTCTACCAGTTGGGCGTCTCGGCCTTGGTCTTGCCGCCGGCGTCGCTGCTGCTGGGCGAGACGGGGA TTATCGGCCAGCCCTCCACCCTGGTCTGGGTCTCGCTGGCTGGGCAGATCGTCGTCGTGGCCTTCGCCTCGTACCTGACG TGGTTCTGGCTGATCTCCCGCTATCCCGCCACCCGGCTGTCGGCGTTTTCATTCCTGACGCCGCTGTTCGGCATGATGTT CGGGGCATGGCTGCTGGGTGAGCGCATCACCTGGGGTCTGGGCGGCGCCATGGCGCTGGTGGCGGCCGGCATCTGGCTGG TGAACCGGAAGTAA
Upstream 100 bases:
>100_bases GCAAGGTGGTGGAGGCGGGCCGCGCCGACGAGTTGTTCAAGGCCCCCAGGACCGCCTACACCCGCGCCCTGATGGCGGCG GCCTTCGATCTGGAGGTGGC
Downstream 100 bases:
>100_bases CGGAGGGATCGTCGCTTGGAATGCCGCTTTCAGGTCGGAAAGGCCGTTCCAGGATGAGATCCCTCGCGTTCACTCGGGAT GACATGATGATTTGGATCAG
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCRFRGVRLFDADGSLAAGLAAG AMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWLVPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGD AMLLAAAVMWGGTTVLIRTSRLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK
Sequences:
>Translated_297_residues MSPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCRFRGVRLFDADGSLAAGLAAG AMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWLVPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGD AMLLAAAVMWGGTTVLIRTSRLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK >Mature_296_residues SPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCRFRGVRLFDADGSLAAGLAAGA MFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWLVPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGDA MLLAAAVMWGGTTVLIRTSRLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLTW FWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31762; Mature: 31631
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCR CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FRGVRLFDADGSLAAGLAAGAMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWL HCCCEEECCCCCHHHHHHHHHHHHHCEEEEEECCEECCCCCEEEEEEHHHHHHHHHHHHH VPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGDAMLLAAAVMWGGTTVLIRTS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC RLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT HHCCCCCCHHHHHHHCCHHEECCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHEEECC >Mature Secondary Structure SPQRHTHLDALAMALMMGLCALWGLNQVAAKVANAGISPVLQAGLRSAGSVLLLLVWCR CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FRGVRLFDADGSLAAGLAAGAMFSAEFALIYWGLEFTPASRAVVFLYTAPFVVALCLHWL HCCCEEECCCCCHHHHHHHHHHHHHCEEEEEECCEECCCCCEEEEEEHHHHHHHHHHHHH VPAERLNRMQSLGLIAAFGGILLAFGDNLSLPDGRQMIGDAMLLAAAVMWGGTTVLIRTS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC RLSSVRPSKTLFYQLGVSALVLPPASLLLGETGIIGQPSTLVWVSLAGQIVVVAFASYLT HHCCCCCCHHHHHHHCCHHEECCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH WFWLISRYPATRLSAFSFLTPLFGMMFGAWLLGERITWGLGGAMALVAAGIWLVNRK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]