| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is folE
Identifier: 83313322
GI number: 83313322
Start: 4633732
End: 4634427
Strand: Reverse
Name: folE
Synonym: amb4223
Alternate gene names: 83313322
Gene position: 4634427-4633732 (Counterclockwise)
Preceding gene: 83313323
Following gene: 83313319
Centisome position: 93.3
GC content: 66.24
Gene sequence:
>696_bases ATGCCCGATCGTGACCACCGCGAAAGGAAAGCCGCCATGAGCAAGGACGCCACCTCTCTCACCCTGCCCAGGGAGCTTCT CCCCGCTACCGGCTCCCGCCTGGACAAGCCCTCGCGGGAAGAGGCCGAGGAGGCGGTGCGCACCCTGCTGCGCTGGGCCG GCGACGATCCCGACCGCGAGGGGCTGGTGGGCACTCCCGACCGGGTGGTGCGCGCCTACGAGGAGTTTTTCTCGGGCTAC GACCAGGACCCCACCGAGATTCTGCACCGCACCTTCGAGGAAACCGACGGCTACGACGAGATGGTGCTGCTGCGCGATAT CCGCCTGGAATCCCATTGCGAGCATCACGTGGTGCCGATCATCGGCAAGGCCCATGTGGCCTATCTGCCCAACCGCCGGG TGGTGGGCATCTCCAAGCTGGCCCGCGTGGTGGAGATCTATTCGCGCCGCCTGCAGATCCAGGAAAAGCTGACGGCCCAG ATCGCCAATACCATCAACGACGTGCTCCAGCCCAAGGGCGTGGCCGTGGTCATCGAAGCCGCCCACCAGTGCATGACCAC CCGCGGCATCCACAAGCCCGGCGTCACCATGGTCACCAGCCGCATGCTCGGCGCCTTCCGCGAGGACCCCGCTACCCGCC GGGAATTCATGGCGCTAATTCACAACCAGCACTCGGGCGGGCTGTCGAACGTGTAG
Upstream 100 bases:
>100_bases CGGCCTTCGACATCGCCATTCCCGCTTTCTCCCTGGACAGCCCGCACGAGAAGCCCCGGCTGAACTAGCCGGGCTTGTAA AATCCGAAAGGCGCAGCCAC
Downstream 100 bases:
>100_bases CCGGGTTAGGCAGGGCGGCCGCCCCGGTCCTTCGCGCCCCCCAGGGTTGGCGCGCCGCGTGCATTGATACCCCCCGACAT GACTGCAACCGGGGGCGTCA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPDRDHRERKAAMSKDATSLTLPRELLPATGSRLDKPSREEAEEAVRTLLRWAGDDPDREGLVGTPDRVVRAYEEFFSGY DQDPTEILHRTFEETDGYDEMVLLRDIRLESHCEHHVVPIIGKAHVAYLPNRRVVGISKLARVVEIYSRRLQIQEKLTAQ IANTINDVLQPKGVAVVIEAAHQCMTTRGIHKPGVTMVTSRMLGAFREDPATRREFMALIHNQHSGGLSNV
Sequences:
>Translated_231_residues MPDRDHRERKAAMSKDATSLTLPRELLPATGSRLDKPSREEAEEAVRTLLRWAGDDPDREGLVGTPDRVVRAYEEFFSGY DQDPTEILHRTFEETDGYDEMVLLRDIRLESHCEHHVVPIIGKAHVAYLPNRRVVGISKLARVVEIYSRRLQIQEKLTAQ IANTINDVLQPKGVAVVIEAAHQCMTTRGIHKPGVTMVTSRMLGAFREDPATRREFMALIHNQHSGGLSNV >Mature_230_residues PDRDHRERKAAMSKDATSLTLPRELLPATGSRLDKPSREEAEEAVRTLLRWAGDDPDREGLVGTPDRVVRAYEEFFSGYD QDPTEILHRTFEETDGYDEMVLLRDIRLESHCEHHVVPIIGKAHVAYLPNRRVVGISKLARVVEIYSRRLQIQEKLTAQI ANTINDVLQPKGVAVVIEAAHQCMTTRGIHKPGVTMVTSRMLGAFREDPATRREFMALIHNQHSGGLSNV
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=203, Percent_Identity=48.2758620689655, Blast_Score=199, Evalue=1e-51, Organism=Homo sapiens, GI4503949, Length=203, Percent_Identity=48.2758620689655, Blast_Score=199, Evalue=1e-51, Organism=Homo sapiens, GI66932970, Length=171, Percent_Identity=44.4444444444444, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI66932972, Length=161, Percent_Identity=46.583850931677, Blast_Score=150, Evalue=7e-37, Organism=Escherichia coli, GI1788476, Length=172, Percent_Identity=39.5348837209302, Blast_Score=117, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17560486, Length=177, Percent_Identity=49.7175141242938, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6321706, Length=178, Percent_Identity=51.123595505618, Blast_Score=186, Evalue=2e-48, Organism=Drosophila melanogaster, GI24656782, Length=191, Percent_Identity=47.6439790575916, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24656796, Length=191, Percent_Identity=47.6439790575916, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24656791, Length=191, Percent_Identity=47.6439790575916, Blast_Score=178, Evalue=3e-45,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26096; Mature: 25965
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRDHRERKAAMSKDATSLTLPRELLPATGSRLDKPSREEAEEAVRTLLRWAGDDPDRE CCCHHHHHHHHHHHCCCCHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC GLVGTPDRVVRAYEEFFSGYDQDPTEILHRTFEETDGYDEMVLLRDIRLESHCEHHVVPI CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEE IGKAHVAYLPNRRVVGISKLARVVEIYSRRLQIQEKLTAQIANTINDVLQPKGVAVVIEA ECCHHEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AHQCMTTRGIHKPGVTMVTSRMLGAFREDPATRREFMALIHNQHSGGLSNV HHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PDRDHRERKAAMSKDATSLTLPRELLPATGSRLDKPSREEAEEAVRTLLRWAGDDPDRE CCHHHHHHHHHHHCCCCHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC GLVGTPDRVVRAYEEFFSGYDQDPTEILHRTFEETDGYDEMVLLRDIRLESHCEHHVVPI CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEE IGKAHVAYLPNRRVVGISKLARVVEIYSRRLQIQEKLTAQIANTINDVLQPKGVAVVIEA ECCHHEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AHQCMTTRGIHKPGVTMVTSRMLGAFREDPATRREFMALIHNQHSGGLSNV HHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]