| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83313234
Identifier: 83313234
GI number: 83313234
Start: 4541957
End: 4542541
Strand: Reverse
Name: 83313234
Synonym: amb4135
Alternate gene names: NA
Gene position: 4542541-4541957 (Counterclockwise)
Preceding gene: 83313235
Following gene: 83313233
Centisome position: 91.45
GC content: 67.86
Gene sequence:
>585_bases ATGAGCCGGCTGTTCCTAGCCCTCGGCATGGCCGCCGCCGTGGCGGTCCAGCCCGTCTCGGCCGCCGAGCCGCCGCGCAA CGTGGCCGAGATCGCTTCGGCCACCTTCGTGCTGGGCTGCGCCGCCCATGTGGGGGCGCTGGACAAGCTGAGGCAGCGGT TGCAGCCCGGCGGAGACCTCTACCTTCCCCGCCTGTCCGATCAGGCGGCCAAGCCGTTTCTCCAGGGCCGTCCGGGCGAG GCCTATCTGCGCGAGGATGCCGGCGTCACCCTGGCGCTGCTGACCAAGGACGATCAATGCGCGGTCTTTGTCCGTCGGGT CTCCACCTCCGCCATCAATGCCCAGGTGGAAAAAGACCTGAAGGCGGCGGTCGGGCGCTATTTCAATGTCCAGGCCGGCG GGCGCGAGAGCAACGGACCGCTGACCTCGCGCTTTCTCGACCTTACGCCCACCGCCACGTACCGCGATGAACTGGTCAAG ACGCACGGGGCCGAGCCCACCGGGCTGCGGGTGATCGTCACCACCTCGGAAAGCGCCAATCCCGATCTTCAGGCCATCAT CACCATCGGAGTGAGGCAGCCATGA
Upstream 100 bases:
>100_bases TCGATTGCCTGCTGGGCGCCCACGCCTTGATGGAGGCCCTGGTGGAGCATGTGACGCAGCAGGATATGCGGATCAAGACC TTCGTGCCCCGGCAATGCGC
Downstream 100 bases:
>100_bases GCCGGATACTCGCCACATTGCTGCTGGTTCTGCTGGCCCTGCCGGCCCAGGCCCAGACCATGGGCGGTCTGGCCACCCGC GACGAGACGTCGCGGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSRLFLALGMAAAVAVQPVSAAEPPRNVAEIASATFVLGCAAHVGALDKLRQRLQPGGDLYLPRLSDQAAKPFLQGRPGE AYLREDAGVTLALLTKDDQCAVFVRRVSTSAINAQVEKDLKAAVGRYFNVQAGGRESNGPLTSRFLDLTPTATYRDELVK THGAEPTGLRVIVTTSESANPDLQAIITIGVRQP
Sequences:
>Translated_194_residues MSRLFLALGMAAAVAVQPVSAAEPPRNVAEIASATFVLGCAAHVGALDKLRQRLQPGGDLYLPRLSDQAAKPFLQGRPGE AYLREDAGVTLALLTKDDQCAVFVRRVSTSAINAQVEKDLKAAVGRYFNVQAGGRESNGPLTSRFLDLTPTATYRDELVK THGAEPTGLRVIVTTSESANPDLQAIITIGVRQP >Mature_193_residues SRLFLALGMAAAVAVQPVSAAEPPRNVAEIASATFVLGCAAHVGALDKLRQRLQPGGDLYLPRLSDQAAKPFLQGRPGEA YLREDAGVTLALLTKDDQCAVFVRRVSTSAINAQVEKDLKAAVGRYFNVQAGGRESNGPLTSRFLDLTPTATYRDELVKT HGAEPTGLRVIVTTSESANPDLQAIITIGVRQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20624; Mature: 20493
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLFLALGMAAAVAVQPVSAAEPPRNVAEIASATFVLGCAAHVGALDKLRQRLQPGGDL CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YLPRLSDQAAKPFLQGRPGEAYLREDAGVTLALLTKDDQCAVFVRRVSTSAINAQVEKDL ECCCCCCHHHCHHHCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH KAAVGRYFNVQAGGRESNGPLTSRFLDLTPTATYRDELVKTHGAEPTGLRVIVTTSESAN HHHHCCEEEEECCCCCCCCCHHHEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC PDLQAIITIGVRQP CCEEEEEEEECCCC >Mature Secondary Structure SRLFLALGMAAAVAVQPVSAAEPPRNVAEIASATFVLGCAAHVGALDKLRQRLQPGGDL CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE YLPRLSDQAAKPFLQGRPGEAYLREDAGVTLALLTKDDQCAVFVRRVSTSAINAQVEKDL ECCCCCCHHHCHHHCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH KAAVGRYFNVQAGGRESNGPLTSRFLDLTPTATYRDELVKTHGAEPTGLRVIVTTSESAN HHHHCCEEEEECCCCCCCCCHHHEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC PDLQAIITIGVRQP CCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA