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The map label for this gene is rmuC [H]

Identifier: 83313223

GI number: 83313223

Start: 4528373

End: 4529743

Strand: Reverse

Name: rmuC [H]

Synonym: amb4124

Alternate gene names: 83313223

Gene position: 4529743-4528373 (Counterclockwise)

Preceding gene: 83313224

Following gene: 83313219

Centisome position: 91.19

GC content: 64.7

Gene sequence:

>1371_bases
GTGCTACAAGGCGACTGTTCCCGTAATGTTCGGATTGCCGCCATGGATTTTGCCCTGATCTCCGCCGCTCTTTCCCTGCT
TGCCCTGATCGGGGTGGCGGTCCTGCTGCTGCGCAAGAAGGACGATCTGTCCGAGCGCCTCGACCGGCTAGAGCGGGTGT
TGCGTGACGAGGCCCGCCAGGACCGGCGCGAGACCGCCGAGATGATCCGCACCTTCCAGGGCGATTCCGCCGCTTCGGCT
GACAAGAACCACACCGAACTGCGCATCCTGGTGGAGACCAAGCTGGCCGAGTTCCGCTCGGATCAGGCCACCCAGGCCCG
CGCCCTGCGCGAAGAGGTGCTGGGCGGCATCAAGCAGTTGGGCGAAGGCATCGGCAAGACCGTGGCGGAACAGACCCGGG
TGGTCTCCGAACATCTGGAAAAGCTGCGCGGCGAGAACACCCAGAAGCTGGAACAGATGCGCCAGACCGTGGACGAGAAG
CTGCAGGGTACTTTGGAAAAGCGCCTGGGCGAGTCCTTCAAGCTGGTCAGCGATCGGCTGGAACAGGTGCACAAGGGCCT
GGGCGAGATGCAAAGCCTGGCCAGCGGCGTCGGCGACCTGAAGCGGGTGCTGACCAACGTCAAGACCCGCGGAACCTGGG
GCGAGGTGCAGTTGGGCGCCCTGCTGGAACAGATCTTCCGCGCCGACCAGTACATGCGCGAGGCCAATTGCAAGAAGGGC
AGCCTGGAGCGCGTCGACTTCGCCATCCGCCTGCCGGGCAAGGGCGACGACGAGCCGGAAGTGCTGCTGCCTATCGATTC
CAAATTCCCCAACGAGGATTACGAGCGGCTGCAACTGGCCGTGGAGCGCGCCGACCCCGATGCCGTCGAGGCCGCCGCCA
AGGGGCTGGAGACCAGGGTCAAGAGCTTTGCCCGCGACATCCGCGACAAATACGTCAATCCGCCCACCACCACCGACTTC
GCCATCCTGTTCCTGCCCACCGAAGGCCTGTATGCCGAAGTGCTGCGCCGCCCCGGTCTGGTGGACTTGATCCAGCGCGA
CTACAAGGTCATCGCCGCCGGGCCGACCACCCTGGGCGCCATCCTCAACGCCATCCAGATGGGCTTCAAGACCATGGCCA
TCGAGAAGCGGTCATCCGAGGTCTGGGAGATTCTGGGCGCGGTCAAGACCGAGTTCGGCAAGTACGGCGACGTGCTCGAC
AAGGTGCAGAAGAAGCTTCAGGAGGCCTCCAAGACCATCGACGACGTGGCGGTGCGCAAACGTGCCATCGACCGGCAATT
GCGTAAGGTCGAGGCCATCCCCGATGCCGGGGTCGAGGCTCTGCTGGCCCTGGGCGCCACCACCATCGACGATACGGGCG
AGGACGAGTGA

Upstream 100 bases:

>100_bases
CGACGAGGCCTTTGCGCCTCCGCCCGGTTTCGATGCGGTGGACGAGCGCCCGCGTGGCGCGGCACGGCTGGTGTTCGTGG
TTTACCGCCGCCCGTGATGC

Downstream 100 bases:

>100_bases
GGCATTCGGGGCTCTCGCCCCGATCCCCAGTCGGGAGGCACAGCCTCCCGAGCCCTCCAGCTTATTGAAACAAAGGGTGG
TCTGGAGGTTCGGCCTCCAG

Product: DNA recombination protein rmuC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MLQGDCSRNVRIAAMDFALISAALSLLALIGVAVLLLRKKDDLSERLDRLERVLRDEARQDRRETAEMIRTFQGDSAASA
DKNHTELRILVETKLAEFRSDQATQARALREEVLGGIKQLGEGIGKTVAEQTRVVSEHLEKLRGENTQKLEQMRQTVDEK
LQGTLEKRLGESFKLVSDRLEQVHKGLGEMQSLASGVGDLKRVLTNVKTRGTWGEVQLGALLEQIFRADQYMREANCKKG
SLERVDFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVEAAAKGLETRVKSFARDIRDKYVNPPTTTDF
AILFLPTEGLYAEVLRRPGLVDLIQRDYKVIAAGPTTLGAILNAIQMGFKTMAIEKRSSEVWEILGAVKTEFGKYGDVLD
KVQKKLQEASKTIDDVAVRKRAIDRQLRKVEAIPDAGVEALLALGATTIDDTGEDE

Sequences:

>Translated_456_residues
MLQGDCSRNVRIAAMDFALISAALSLLALIGVAVLLLRKKDDLSERLDRLERVLRDEARQDRRETAEMIRTFQGDSAASA
DKNHTELRILVETKLAEFRSDQATQARALREEVLGGIKQLGEGIGKTVAEQTRVVSEHLEKLRGENTQKLEQMRQTVDEK
LQGTLEKRLGESFKLVSDRLEQVHKGLGEMQSLASGVGDLKRVLTNVKTRGTWGEVQLGALLEQIFRADQYMREANCKKG
SLERVDFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVEAAAKGLETRVKSFARDIRDKYVNPPTTTDF
AILFLPTEGLYAEVLRRPGLVDLIQRDYKVIAAGPTTLGAILNAIQMGFKTMAIEKRSSEVWEILGAVKTEFGKYGDVLD
KVQKKLQEASKTIDDVAVRKRAIDRQLRKVEAIPDAGVEALLALGATTIDDTGEDE
>Mature_456_residues
MLQGDCSRNVRIAAMDFALISAALSLLALIGVAVLLLRKKDDLSERLDRLERVLRDEARQDRRETAEMIRTFQGDSAASA
DKNHTELRILVETKLAEFRSDQATQARALREEVLGGIKQLGEGIGKTVAEQTRVVSEHLEKLRGENTQKLEQMRQTVDEK
LQGTLEKRLGESFKLVSDRLEQVHKGLGEMQSLASGVGDLKRVLTNVKTRGTWGEVQLGALLEQIFRADQYMREANCKKG
SLERVDFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVEAAAKGLETRVKSFARDIRDKYVNPPTTTDF
AILFLPTEGLYAEVLRRPGLVDLIQRDYKVIAAGPTTLGAILNAIQMGFKTMAIEKRSSEVWEILGAVKTEFGKYGDVLD
KVQKKLQEASKTIDDVAVRKRAIDRQLRKVEAIPDAGVEALLALGATTIDDTGEDE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 50752; Mature: 50752

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGDCSRNVRIAAMDFALISAALSLLALIGVAVLLLRKKDDLSERLDRLERVLRDEARQ
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DRRETAEMIRTFQGDSAASADKNHTELRILVETKLAEFRSDQATQARALREEVLGGIKQL
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GEGIGKTVAEQTRVVSEHLEKLRGENTQKLEQMRQTVDEKLQGTLEKRLGESFKLVSDRL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
EQVHKGLGEMQSLASGVGDLKRVLTNVKTRGTWGEVQLGALLEQIFRADQYMREANCKKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SLERVDFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVEAAAKGLETRV
CHHHEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KSFARDIRDKYVNPPTTTDFAILFLPTEGLYAEVLRRPGLVDLIQRDYKVIAAGPTTLGA
HHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHCCEEEECCHHHHHH
ILNAIQMGFKTMAIEKRSSEVWEILGAVKTEFGKYGDVLDKVQKKLQEASKTIDDVAVRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIDRQLRKVEAIPDAGVEALLALGATTIDDTGEDE
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLQGDCSRNVRIAAMDFALISAALSLLALIGVAVLLLRKKDDLSERLDRLERVLRDEARQ
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DRRETAEMIRTFQGDSAASADKNHTELRILVETKLAEFRSDQATQARALREEVLGGIKQL
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GEGIGKTVAEQTRVVSEHLEKLRGENTQKLEQMRQTVDEKLQGTLEKRLGESFKLVSDRL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
EQVHKGLGEMQSLASGVGDLKRVLTNVKTRGTWGEVQLGALLEQIFRADQYMREANCKKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SLERVDFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVEAAAKGLETRV
CHHHEEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KSFARDIRDKYVNPPTTTDFAILFLPTEGLYAEVLRRPGLVDLIQRDYKVIAAGPTTLGA
HHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHCCEEEECCHHHHHH
ILNAIQMGFKTMAIEKRSSEVWEILGAVKTEFGKYGDVLDKVQKKLQEASKTIDDVAVRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAIDRQLRKVEAIPDAGVEALLALGATTIDDTGEDE
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]