| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83313081
Identifier: 83313081
GI number: 83313081
Start: 4394039
End: 4394644
Strand: Reverse
Name: 83313081
Synonym: amb3982
Alternate gene names: NA
Gene position: 4394644-4394039 (Counterclockwise)
Preceding gene: 83313082
Following gene: 83313080
Centisome position: 88.47
GC content: 64.52
Gene sequence:
>606_bases GTGAAGCCGTTCTATCGTCTGCTTGCTGCCGTCGCCGCGCTGTTTCTGGTGACCCAGACCGCCGCCGCCGCCGCCGACCT CAGCTATTCCATCGACCAGGTCCTGGGCAAGCCCGACGCGCCCATCACGGTGATCGAGTACGCCTCGACCACCTGCCCGC ACTGCGCCACCTTCCACAAGACCACGCTGCCCAAGTTCAAATCCGAGTGGGTCGAGACCGGCAAGGCCAAGCTGATCTAC CGCGACTTCCCCACCGGGCCGCGCGGCCTGTCGGTAGGCGCCTCGATGATCGCCCATTGCGCCGGGCCGGACCGTTATTT CGGCCTGCTGGCCCTGATCATGGAGCAGCAGGAGAAGTGGATGAACTCGCAGAACCCGCTGGTCGAGCTGAAGAAGCTGG CCAAGCTGGCCGGTCTGGGCGAGGACAAGGTGGATGATTGCCTGAAGCGCCAGGATCTGGCCAACGCCATCAACGAGCGC GCCAAGGAGGGCAACGAGAAGCTGGGCGTGGAAAGCACCCCCTCGCTGATCATCGCCGGCAAGGTCATCCCCGGCGCCAT TCCCTATGACGAGTTGGACAAGCTGCTGAAGGCCGCGTCCAAGTAG
Upstream 100 bases:
>100_bases TCGGCGGCTCCGTCGTCTTATTGAGTCCCTACGCCTTGTGCCGGGGCGGCCGAGCCCCTAATATCCCGCCCGGATTTCCG ATTTCCGGAGGGACCTCAAG
Downstream 100 bases:
>100_bases TCTCATTCCAGGGGCCGTCCCGGGTGATCCAGTTCACCAAGCTGCGTCTGTCGGGCTTCAAGTCCTTCGTCGATCCGGCG GAGCTCGTGATCGAGCCCGG
Product: protein-disulfide isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKPFYRLLAAVAALFLVTQTAAAAADLSYSIDQVLGKPDAPITVIEYASTTCPHCATFHKTTLPKFKSEWVETGKAKLIY RDFPTGPRGLSVGASMIAHCAGPDRYFGLLALIMEQQEKWMNSQNPLVELKKLAKLAGLGEDKVDDCLKRQDLANAINER AKEGNEKLGVESTPSLIIAGKVIPGAIPYDELDKLLKAASK
Sequences:
>Translated_201_residues MKPFYRLLAAVAALFLVTQTAAAAADLSYSIDQVLGKPDAPITVIEYASTTCPHCATFHKTTLPKFKSEWVETGKAKLIY RDFPTGPRGLSVGASMIAHCAGPDRYFGLLALIMEQQEKWMNSQNPLVELKKLAKLAGLGEDKVDDCLKRQDLANAINER AKEGNEKLGVESTPSLIIAGKVIPGAIPYDELDKLLKAASK >Mature_201_residues MKPFYRLLAAVAALFLVTQTAAAAADLSYSIDQVLGKPDAPITVIEYASTTCPHCATFHKTTLPKFKSEWVETGKAKLIY RDFPTGPRGLSVGASMIAHCAGPDRYFGLLALIMEQQEKWMNSQNPLVELKKLAKLAGLGEDKVDDCLKRQDLANAINER AKEGNEKLGVESTPSLIIAGKVIPGAIPYDELDKLLKAASK
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21819; Mature: 21819
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFYRLLAAVAALFLVTQTAAAAADLSYSIDQVLGKPDAPITVIEYASTTCPHCATFHK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH TTLPKFKSEWVETGKAKLIYRDFPTGPRGLSVGASMIAHCAGPDRYFGLLALIMEQQEKW HHCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MNSQNPLVELKKLAKLAGLGEDKVDDCLKRQDLANAINERAKEGNEKLGVESTPSLIIAG CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC KVIPGAIPYDELDKLLKAASK CCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKPFYRLLAAVAALFLVTQTAAAAADLSYSIDQVLGKPDAPITVIEYASTTCPHCATFHK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHH TTLPKFKSEWVETGKAKLIYRDFPTGPRGLSVGASMIAHCAGPDRYFGLLALIMEQQEKW HHCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH MNSQNPLVELKKLAKLAGLGEDKVDDCLKRQDLANAINERAKEGNEKLGVESTPSLIIAG CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC KVIPGAIPYDELDKLLKAASK CCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA