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The map label for this gene is agmR [H]

Identifier: 83312988

GI number: 83312988

Start: 4297962

End: 4298834

Strand: Reverse

Name: agmR [H]

Synonym: amb3889

Alternate gene names: 83312988

Gene position: 4298834-4297962 (Counterclockwise)

Preceding gene: 83312992

Following gene: 83312987

Centisome position: 86.55

GC content: 63.69

Gene sequence:

>873_bases
ATGATAGATGGTCATGGGCGTGCTCATGGCGGCGGACCATACTGGAAGTCAGGCGTGAAGGCTAGGGACCGTCGCGGTCC
AATGCTTTCCGACTTGCGGCAAAAGTCGTGGTGCGTTGCGTTTTTTTTCGTGGCGGTGGCGCCTTATTCTTGCGACCATG
TCGCAGATGGGTGGTGGCGCTTTAGATGCCGGGAGATGCATGGTGGGGACGAGATGAAGATTCTTATCGCCGATGACCAT
GAACTGTTTCGTGACGGGCTCCGCCATGTCCTGGATCAGTTCGAAGGGCCGCCCACGATCATCGAGGCCTGTGACTTTCC
TCAGGCCATCGCCGCTGTCCAGAGCGAGAAGGACATCGACATCGTTCTGCTCGACCTGACCATGCCTGGCATGGCGTGGA
CCGAGGGGCTGGCCAAGCTGAAGGAATTGCTGCCGTCGACGGTGCCGCTGATCGTGCTGTCGGCCTCCGACGACCGCCGC
CATGTGCTGCAGGCGGTCAATATGGGAGCCGCTGGCTTCATCCCCAAGACCTCGTCCTCGCGGGTCATGCTGTCGGCCCT
GAAGCTGGTGCTGTCGGGTGGCGTCTACCTGCCGCCGGCCCTGCTGGAGCAGGGTGGTCCGGGCGGCGATGACGGGGCGC
CGGTGGCCGGCGAATCGGCCATCGCCTCGCTGACGCCGCGTCAGCGCGAAGTGCTGGCCCTGCTGGGCCAGGGCAAGTCC
AACAAGGAAATCGCTCGCGTGCTGGAACTGGCCGAGGGAACGGTCAAGCTGCACGTGACCGCCATCTTGAAGGCGCTCAA
CGTCAACAACCGGACCCGTGCGGTGGTTGCCGCCTCCCATCTGGGGCTGACCGCCCCCGATGCCGCACTCTGA

Upstream 100 bases:

>100_bases
CCGGGCCGGAGAAATGGATAAAGCCGTCGGCCTCGTCCTGGGACGAACCGCTATATACCCCTGTCGTCTGGGCATATTGC
CACTCGGTCCGACGGCATAC

Downstream 100 bases:

>100_bases
CGGCGAGCCCGTCTGGCACCGGCTTGGTGCGGACGCGGTTCGCGCCCGTCTCGGATGCGGAACCGAGGGGCTGGCCGAGG
CCGAGATCCTGGCCCGCCGC

Product: response regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIDGHGRAHGGGPYWKSGVKARDRRGPMLSDLRQKSWCVAFFFVAVAPYSCDHVADGWWRFRCREMHGGDEMKILIADDH
ELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDIDIVLLDLTMPGMAWTEGLAKLKELLPSTVPLIVLSASDDRR
HVLQAVNMGAAGFIPKTSSSRVMLSALKLVLSGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKS
NKEIARVLELAEGTVKLHVTAILKALNVNNRTRAVVAASHLGLTAPDAAL

Sequences:

>Translated_290_residues
MIDGHGRAHGGGPYWKSGVKARDRRGPMLSDLRQKSWCVAFFFVAVAPYSCDHVADGWWRFRCREMHGGDEMKILIADDH
ELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDIDIVLLDLTMPGMAWTEGLAKLKELLPSTVPLIVLSASDDRR
HVLQAVNMGAAGFIPKTSSSRVMLSALKLVLSGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKS
NKEIARVLELAEGTVKLHVTAILKALNVNNRTRAVVAASHLGLTAPDAAL
>Mature_290_residues
MIDGHGRAHGGGPYWKSGVKARDRRGPMLSDLRQKSWCVAFFFVAVAPYSCDHVADGWWRFRCREMHGGDEMKILIADDH
ELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDIDIVLLDLTMPGMAWTEGLAKLKELLPSTVPLIVLSASDDRR
HVLQAVNMGAAGFIPKTSSSRVMLSALKLVLSGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKS
NKEIARVLELAEGTVKLHVTAILKALNVNNRTRAVVAASHLGLTAPDAAL

Specific function: Positive activator for glycerol metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=209, Percent_Identity=34.9282296650718, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788222, Length=200, Percent_Identity=28, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787473, Length=211, Percent_Identity=32.7014218009479, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790102, Length=199, Percent_Identity=29.6482412060301, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786747, Length=191, Percent_Identity=26.1780104712042, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789937, Length=203, Percent_Identity=26.6009852216749, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 31151; Mature: 31151

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDGHGRAHGGGPYWKSGVKARDRRGPMLSDLRQKSWCVAFFFVAVAPYSCDHVADGWWR
CCCCCCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH
FRCREMHGGDEMKILIADDHELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDID
EEEHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCCCE
IVLLDLTMPGMAWTEGLAKLKELLPSTVPLIVLSASDDRRHVLQAVNMGAAGFIPKTSSS
EEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
RVMLSALKLVLSGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKS
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCC
NKEIARVLELAEGTVKLHVTAILKALNVNNRTRAVVAASHLGLTAPDAAL
HHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCC
>Mature Secondary Structure
MIDGHGRAHGGGPYWKSGVKARDRRGPMLSDLRQKSWCVAFFFVAVAPYSCDHVADGWWR
CCCCCCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHH
FRCREMHGGDEMKILIADDHELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDID
EEEHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCCCE
IVLLDLTMPGMAWTEGLAKLKELLPSTVPLIVLSASDDRRHVLQAVNMGAAGFIPKTSSS
EEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCC
RVMLSALKLVLSGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKS
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCC
NKEIARVLELAEGTVKLHVTAILKALNVNNRTRAVVAASHLGLTAPDAAL
HHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHHEEEEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]