| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312958
Identifier: 83312958
GI number: 83312958
Start: 4262715
End: 4263959
Strand: Reverse
Name: 83312958
Synonym: amb3859
Alternate gene names: NA
Gene position: 4263959-4262715 (Counterclockwise)
Preceding gene: 83312959
Following gene: 83312937
Centisome position: 85.84
GC content: 63.78
Gene sequence:
>1245_bases GTGGGATGCGACATGAGTGACGACCAGGATCTGCTGAAGGCTATCGCCCAGATACGCCGCTCGCCCTATGGCAAGCGGGT GATCCATGTCTTCACCTCCTGGGCCAAGGGCGATCCCAAGCACGGCGAGAAGCTGGCCAAGGGCCGCGATCTGGTGTCCC GCAATCTGTTCAATTCCGTGGATTCCGGCTGTTTCCTGCTGTCGTCGGGGGACATGGTGTTCATCTGCTCGCAGGTTTCG GCGGCGGTGATCCAGACCGTGTGCTCGCGCCTCGAGGCCCTGTTCTTCGGCGACAAGCCGCCCCGGGCCAATTCCTATGG CGAGAACAAGTATTTCAAGGTGTTCGACGCCGGCCGCGACCTGGCCAAGCTGATCACCTCGGTCAAGGCGCTGGTGGCGG TCGCTCCCACCGCCGCCCGCCCGGCCATCGGAATGAAGGAATTCGATTCCATCGTCCGTATCATCCGCGACAGCGATATC CGGGCCATGGTCTTCAATCAGCCGGTCTATCGCTGGGCGGGCAAGAAGCCGGGGATCGAGTACCTGGAGTTCTTCGCCTC GCTGGACCAGATGCGCAAGGCGGCTTGCCCCGAACACGACATCGCCGGCAATCCGGCATTGTTCCACATGATCAAGGCCG AACTGGACCTGCGGCTGATGCGGATCATCGGCCGCGAGATCGGCGAGTACCGCCACAAGGCCTTTTCCATCAACCTGCTG GGCACCAGCCTGCTGTCCAAGGAGTTCGAGACCTTCATGGACGGCGTTCCGGCGCGGCTGTCGGGCAAGATCCTGGCCGA AATCGACCGTGGCGACTTCCTGCAGCATTCCGGCGATCTGGACGCCCTGACGCGGCGGGCCTCGGACCTGAACGTCCCTC TGTGCGTCGACGGCCTGTCGCTCAGCGATCTGCAGGTGTTCCGCCTGCCCGCCGTGGCGGAATTCGCCAAGATCAAGTGG TCCGAGCAGATCACCACCATGCCGCGCCGCGATCTGGAAGTGGCCATTCGCGCCATCAAGGAATTCGGCCCGGACAAGGT GGTGCTGACCCGCTGCGACAGCGAGCGGTCGCTGGACTTCGCCCATGCCATGGGCATTCCCTTCGTTCAGGGGTATCTGG CGGACAAGATGTTCCGCGCCGGCGTCAACTTCACCGAGGGACGCAACGAGGCCCCCGCCGTCAGTCCGCCGCGCCGGTCA GCGCCAGCCATTCCTGCTCAGACAGCGTCGCTATGCCCAGCTTGA
Upstream 100 bases:
>100_bases GAACATCATGAACAAATTGGGGGTGAGGACACCGGTGGCCTTGGCGGCCATCGCCCTGCGGGAGGGGCTGGTGGTCTGAC CCCGCAACACGGCGACAGGG
Downstream 100 bases:
>100_bases CCGCCTCGGCGGCCTTGGACCCGGCATCGGCCCCCACCACCACGTAATCGGTCTTCTTCGAGACCGAGCCCACCACCTTG GCGCCCAGGGCTTCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MGCDMSDDQDLLKAIAQIRRSPYGKRVIHVFTSWAKGDPKHGEKLAKGRDLVSRNLFNSVDSGCFLLSSGDMVFICSQVS AAVIQTVCSRLEALFFGDKPPRANSYGENKYFKVFDAGRDLAKLITSVKALVAVAPTAARPAIGMKEFDSIVRIIRDSDI RAMVFNQPVYRWAGKKPGIEYLEFFASLDQMRKAACPEHDIAGNPALFHMIKAELDLRLMRIIGREIGEYRHKAFSINLL GTSLLSKEFETFMDGVPARLSGKILAEIDRGDFLQHSGDLDALTRRASDLNVPLCVDGLSLSDLQVFRLPAVAEFAKIKW SEQITTMPRRDLEVAIRAIKEFGPDKVVLTRCDSERSLDFAHAMGIPFVQGYLADKMFRAGVNFTEGRNEAPAVSPPRRS APAIPAQTASLCPA
Sequences:
>Translated_414_residues MGCDMSDDQDLLKAIAQIRRSPYGKRVIHVFTSWAKGDPKHGEKLAKGRDLVSRNLFNSVDSGCFLLSSGDMVFICSQVS AAVIQTVCSRLEALFFGDKPPRANSYGENKYFKVFDAGRDLAKLITSVKALVAVAPTAARPAIGMKEFDSIVRIIRDSDI RAMVFNQPVYRWAGKKPGIEYLEFFASLDQMRKAACPEHDIAGNPALFHMIKAELDLRLMRIIGREIGEYRHKAFSINLL GTSLLSKEFETFMDGVPARLSGKILAEIDRGDFLQHSGDLDALTRRASDLNVPLCVDGLSLSDLQVFRLPAVAEFAKIKW SEQITTMPRRDLEVAIRAIKEFGPDKVVLTRCDSERSLDFAHAMGIPFVQGYLADKMFRAGVNFTEGRNEAPAVSPPRRS APAIPAQTASLCPA >Mature_413_residues GCDMSDDQDLLKAIAQIRRSPYGKRVIHVFTSWAKGDPKHGEKLAKGRDLVSRNLFNSVDSGCFLLSSGDMVFICSQVSA AVIQTVCSRLEALFFGDKPPRANSYGENKYFKVFDAGRDLAKLITSVKALVAVAPTAARPAIGMKEFDSIVRIIRDSDIR AMVFNQPVYRWAGKKPGIEYLEFFASLDQMRKAACPEHDIAGNPALFHMIKAELDLRLMRIIGREIGEYRHKAFSINLLG TSLLSKEFETFMDGVPARLSGKILAEIDRGDFLQHSGDLDALTRRASDLNVPLCVDGLSLSDLQVFRLPAVAEFAKIKWS EQITTMPRRDLEVAIRAIKEFGPDKVVLTRCDSERSLDFAHAMGIPFVQGYLADKMFRAGVNFTEGRNEAPAVSPPRRSA PAIPAQTASLCPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45791; Mature: 45660
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCDMSDDQDLLKAIAQIRRSPYGKRVIHVFTSWAKGDPKHGEKLAKGRDLVSRNLFNSV CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC DSGCFLLSSGDMVFICSQVSAAVIQTVCSRLEALFFGDKPPRANSYGENKYFKVFDAGRD CCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHH LAKLITSVKALVAVAPTAARPAIGMKEFDSIVRIIRDSDIRAMVFNQPVYRWAGKKPGIE HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCHH YLEFFASLDQMRKAACPEHDIAGNPALFHMIKAELDLRLMRIIGREIGEYRHKAFSINLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHH GTSLLSKEFETFMDGVPARLSGKILAEIDRGDFLQHSGDLDALTRRASDLNVPLCVDGLS HHHHHHHHHHHHHCCCCCHHCCCEEEEECCCCHHHCCCCHHHHHHHHCCCCCCEEECCCC LSDLQVFRLPAVAEFAKIKWSEQITTMPRRDLEVAIRAIKEFGPDKVVLTRCDSERSLDF CCCCHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH AHAMGIPFVQGYLADKMFRAGVNFTEGRNEAPAVSPPRRSAPAIPAQTASLCPA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GCDMSDDQDLLKAIAQIRRSPYGKRVIHVFTSWAKGDPKHGEKLAKGRDLVSRNLFNSV CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC DSGCFLLSSGDMVFICSQVSAAVIQTVCSRLEALFFGDKPPRANSYGENKYFKVFDAGRD CCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHH LAKLITSVKALVAVAPTAARPAIGMKEFDSIVRIIRDSDIRAMVFNQPVYRWAGKKPGIE HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCHH YLEFFASLDQMRKAACPEHDIAGNPALFHMIKAELDLRLMRIIGREIGEYRHKAFSINLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHH GTSLLSKEFETFMDGVPARLSGKILAEIDRGDFLQHSGDLDALTRRASDLNVPLCVDGLS HHHHHHHHHHHHHCCCCCHHCCCEEEEECCCCHHHCCCCHHHHHHHHCCCCCCEEECCCC LSDLQVFRLPAVAEFAKIKWSEQITTMPRRDLEVAIRAIKEFGPDKVVLTRCDSERSLDF CCCCHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH AHAMGIPFVQGYLADKMFRAGVNFTEGRNEAPAVSPPRRSAPAIPAQTASLCPA HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA