| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312888
Identifier: 83312888
GI number: 83312888
Start: 4172466
End: 4172954
Strand: Reverse
Name: 83312888
Synonym: amb3789
Alternate gene names: NA
Gene position: 4172954-4172466 (Counterclockwise)
Preceding gene: 83312893
Following gene: 83312883
Centisome position: 84.01
GC content: 62.78
Gene sequence:
>489_bases GTGTTGAGCAGCGCGATGTCGGTGGTTTCGATGGAATCCAGCAGGGTGCTGGCGAGCGACGACAGCTGGGTGGTGGTGAA GCCGCTGATGGCCGTGGTGCTGAGGGCGGCGATGTCCGAGGTCGAGAACGCGCCGAGCTGCGAGGCGTTGAGGACGCCGA GCTGGGCCGCGCTGAAGACGATCTGGGTATTGTCGAAGGCCGCGACCTGCGTCGAACTCAGCACGCTGAGCTGCGTCGTG GTCAGTGCCGCGATGTCGGTGGTTTCCAGAGCTTTGATCTGGGTGGCGGTCAGCGCCTGCAGCTGGGTGGAGACCAGTGC CGCGATGTCCGTGGTGTCCCACGCCGCGATGTTCGTCGTCGTCAGTGCCGCAATGGCCGCGGCCGACTGGAAGGTGACTG AAGAAACCACGGCTACCCCCTTTCTGGAGATTTACGCGCCGCTTCGGACGCTCGCTCGCTTAAAACATATTGCCACTCAG GTTAATTAA
Upstream 100 bases:
>100_bases GGCGGCGCTCAATCCGGCCACGGCCGTGGTGGAGAGCGCATTCAGATTGGTGGTCGACAGAGCGGCAAGCTGCGAGGTCT TGAGCGAGGAGAGCTGAGTG
Downstream 100 bases:
>100_bases CTACCAAAATGCAGGCCTCGACGCAACGAATTTATGGCTGATCGATTCGGCGCATCTCATTGGAATCTGCGGGATTCCGC CGGCGGCAAAGCAAGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLSSAMSVVSMESSRVLASDDSWVVVKPLMAVVLRAAMSEVENAPSCEALRTPSWAALKTIWVLSKAATCVELSTLSCVV VSAAMSVVSRALIWVAVSACSWVETSAAMSVVSHAAMFVVVSAAMAAADWKVTEETTATPFLEIYAPLRTLARLKHIATQ VN
Sequences:
>Translated_162_residues MLSSAMSVVSMESSRVLASDDSWVVVKPLMAVVLRAAMSEVENAPSCEALRTPSWAALKTIWVLSKAATCVELSTLSCVV VSAAMSVVSRALIWVAVSACSWVETSAAMSVVSHAAMFVVVSAAMAAADWKVTEETTATPFLEIYAPLRTLARLKHIATQ VN >Mature_162_residues MLSSAMSVVSMESSRVLASDDSWVVVKPLMAVVLRAAMSEVENAPSCEALRTPSWAALKTIWVLSKAATCVELSTLSCVV VSAAMSVVSRALIWVAVSACSWVETSAAMSVVSHAAMFVVVSAAMAAADWKVTEETTATPFLEIYAPLRTLARLKHIATQ VN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17178; Mature: 17178
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSAMSVVSMESSRVLASDDSWVVVKPLMAVVLRAAMSEVENAPSCEALRTPSWAALKT CCCHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHH IWVLSKAATCVELSTLSCVVVSAAMSVVSRALIWVAVSACSWVETSAAMSVVSHAAMFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSAAMAAADWKVTEETTATPFLEIYAPLRTLARLKHIATQVN HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSSAMSVVSMESSRVLASDDSWVVVKPLMAVVLRAAMSEVENAPSCEALRTPSWAALKT CCCHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHH IWVLSKAATCVELSTLSCVVVSAAMSVVSRALIWVAVSACSWVETSAAMSVVSHAAMFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSAAMAAADWKVTEETTATPFLEIYAPLRTLARLKHIATQVN HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA