| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312769
Identifier: 83312769
GI number: 83312769
Start: 4030807
End: 4032171
Strand: Reverse
Name: 83312769
Synonym: amb3670
Alternate gene names: NA
Gene position: 4032171-4030807 (Counterclockwise)
Preceding gene: 83312770
Following gene: 83312768
Centisome position: 81.18
GC content: 60.73
Gene sequence:
>1365_bases GTGTCCACACCATTTTGCTCCGCAGCCCCACCTTGGGCTCCACCCGACCTCACGTCCCTGACCCGCCACAGGGCGATCAT TTTTCCGGCGCTTCAGCCGTTCAACACCAATCTGGTCAATGACCCTCGGGCGCAGAAGTTCCTTGCCTATGCCGGTTTCA AGTCCTTTGACATTCTCAACTTCCAGCACACCAGCGGGTACTTCCATTACCCCTACGCCTTGGTCAGTGCGGGCAACGCC AACCTCAATATCGTTGCCTCACAAGCGGAAGTAAGCCCTGCATGGCGGCGCAATCTGCTGCTCGGGACGACGTTTCTTGA TAGCGGCGGCTTCTCGGTGGCGACTGGCCAACTCAGCGTCCAGGAATACTTCCAGCGCCGACATCAGCTCTGGGCTTGGC AGGACGCCTTTGCCCAGATGGGCAACGTGATCGTCGCGGGCATGGACGTGCCCACTGCCGCGTTCCGCAGGGGCGTGCCC GGCATCCCCGGTTATCAGAACTGTCATCTGCGCACCGAAAGCAACATCTTGGATCAGCTTCGGCACCGCATCGCGGGGCT CTACCGCCTACTGAACGTCATCCAAGGGCTGACGGGCGGATATGGCCCGGAAAGCCTGCTCTACTGGTACCGGCACATCA AGTACCTCAATGAGGTACGGCTCTGGGGCGAACAAGCCTGCGAGGGTTGGGCGCTGGGTGGGCTCTGGTGGCTGGAGCCT GAAGATTTGCTGCTCTTGCTTTGGCACATGTACCACGACGGCATGCTGTCCGGCCGGAACAATTGGCTGCATGTCTTCGG CGTCACCGACGCCCGGATGGTCGCGATCTTCTCGCTGATCCAGAAGGCGCTTCGGTACGAACTCCGTGACCCCAAATTCA CGATCTCCTGCGACTCCTCGAACCCGACCAAGAACATGGGAAAGGGCGGCAGCCGATATCTCGGCACCGGCAATGTCGTT GCGACGCAACGCCTACCCGATAGCTCCTTGAAGAAGGACGGTGCCCATCGCTTTCCGCTGCTGTTCGCTGAGGGCAAGGT CTTTCCCTACACGACCGCCGTCCCGTTTAGCGGCTTCACCCCGTGGCAAATCAGCGCCACCGAGGACCTTCTGAAGGGCA CCGTGCTGGAGGGGACGCCGCTTCATTCGGCCTACATCCTCCAGGGAGACAAGGCAAATGGCGGCCTAAACCCGCTCGGG CAGATGGCCATGGCCTTCGTCAACACCGAAGCCTTCCTGCGTCAGACCTACTCAGTCGTTGACCGCTACTTCGTAGCGAA CGAACGGAATCTCGTCCCGCTGATCGTCCAAATGCTGCGCAGCAACAGGCCCGAGCAGTGGCTGCCGCTGATCGCCTTCC CCTGA
Upstream 100 bases:
>100_bases TCGCTATGCCCGCGCCCCCGTGGTCGAGATCGCCTAGCCCTCACGAACCAGCCGTTCCGTAGTCCAAACCCTGCCAACGG CAGAAATGAGGAGAATTATC
Downstream 100 bases:
>100_bases CCCAACCCGTCCCCTCTGGAGAACATCATGATCACCAACGACAAACTTTCCGCCACTTCCACCACTACTGACACCCAGGA GACCGCCATGAACGCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSTPFCSAAPPWAPPDLTSLTRHRAIIFPALQPFNTNLVNDPRAQKFLAYAGFKSFDILNFQHTSGYFHYPYALVSAGNA NLNIVASQAEVSPAWRRNLLLGTTFLDSGGFSVATGQLSVQEYFQRRHQLWAWQDAFAQMGNVIVAGMDVPTAAFRRGVP GIPGYQNCHLRTESNILDQLRHRIAGLYRLLNVIQGLTGGYGPESLLYWYRHIKYLNEVRLWGEQACEGWALGGLWWLEP EDLLLLLWHMYHDGMLSGRNNWLHVFGVTDARMVAIFSLIQKALRYELRDPKFTISCDSSNPTKNMGKGGSRYLGTGNVV ATQRLPDSSLKKDGAHRFPLLFAEGKVFPYTTAVPFSGFTPWQISATEDLLKGTVLEGTPLHSAYILQGDKANGGLNPLG QMAMAFVNTEAFLRQTYSVVDRYFVANERNLVPLIVQMLRSNRPEQWLPLIAFP
Sequences:
>Translated_454_residues MSTPFCSAAPPWAPPDLTSLTRHRAIIFPALQPFNTNLVNDPRAQKFLAYAGFKSFDILNFQHTSGYFHYPYALVSAGNA NLNIVASQAEVSPAWRRNLLLGTTFLDSGGFSVATGQLSVQEYFQRRHQLWAWQDAFAQMGNVIVAGMDVPTAAFRRGVP GIPGYQNCHLRTESNILDQLRHRIAGLYRLLNVIQGLTGGYGPESLLYWYRHIKYLNEVRLWGEQACEGWALGGLWWLEP EDLLLLLWHMYHDGMLSGRNNWLHVFGVTDARMVAIFSLIQKALRYELRDPKFTISCDSSNPTKNMGKGGSRYLGTGNVV ATQRLPDSSLKKDGAHRFPLLFAEGKVFPYTTAVPFSGFTPWQISATEDLLKGTVLEGTPLHSAYILQGDKANGGLNPLG QMAMAFVNTEAFLRQTYSVVDRYFVANERNLVPLIVQMLRSNRPEQWLPLIAFP >Mature_453_residues STPFCSAAPPWAPPDLTSLTRHRAIIFPALQPFNTNLVNDPRAQKFLAYAGFKSFDILNFQHTSGYFHYPYALVSAGNAN LNIVASQAEVSPAWRRNLLLGTTFLDSGGFSVATGQLSVQEYFQRRHQLWAWQDAFAQMGNVIVAGMDVPTAAFRRGVPG IPGYQNCHLRTESNILDQLRHRIAGLYRLLNVIQGLTGGYGPESLLYWYRHIKYLNEVRLWGEQACEGWALGGLWWLEPE DLLLLLWHMYHDGMLSGRNNWLHVFGVTDARMVAIFSLIQKALRYELRDPKFTISCDSSNPTKNMGKGGSRYLGTGNVVA TQRLPDSSLKKDGAHRFPLLFAEGKVFPYTTAVPFSGFTPWQISATEDLLKGTVLEGTPLHSAYILQGDKANGGLNPLGQ MAMAFVNTEAFLRQTYSVVDRYFVANERNLVPLIVQMLRSNRPEQWLPLIAFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50949; Mature: 50818
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPFCSAAPPWAPPDLTSLTRHRAIIFPALQPFNTNLVNDPRAQKFLAYAGFKSFDILN CCCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE FQHTSGYFHYPYALVSAGNANLNIVASQAEVSPAWRRNLLLGTTFLDSGGFSVATGQLSV EEECCCEEECCEEEEECCCCCEEEEECCCCCCHHHHCCEEEEEEEECCCCCEEEECCCHH QEYFQRRHQLWAWQDAFAQMGNVIVAGMDVPTAAFRRGVPGIPGYQNCHLRTESNILDQL HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCCCCEEECHHHHHHHH RHRIAGLYRLLNVIQGLTGGYGPESLLYWYRHIKYLNEVRLWGEQACEGWALGGLWWLEP HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECH EDLLLLLWHMYHDGMLSGRNNWLHVFGVTDARMVAIFSLIQKALRYELRDPKFTISCDSS HHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC NPTKNMGKGGSRYLGTGNVVATQRLPDSSLKKDGAHRFPLLFAEGKVFPYTTAVPFSGFT CCCCCCCCCCCEEECCCCEEEECCCCCHHHHCCCCCCCCEEEECCEEEEEEEECCCCCCC PWQISATEDLLKGTVLEGTPLHSAYILQGDKANGGLNPLGQMAMAFVNTEAFLRQTYSVV CEEECCHHHHHCCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DRYFVANERNLVPLIVQMLRSNRPEQWLPLIAFP HHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECC >Mature Secondary Structure STPFCSAAPPWAPPDLTSLTRHRAIIFPALQPFNTNLVNDPRAQKFLAYAGFKSFDILN CCCCCCCCCCCCCCCHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE FQHTSGYFHYPYALVSAGNANLNIVASQAEVSPAWRRNLLLGTTFLDSGGFSVATGQLSV EEECCCEEECCEEEEECCCCCEEEEECCCCCCHHHHCCEEEEEEEECCCCCEEEECCCHH QEYFQRRHQLWAWQDAFAQMGNVIVAGMDVPTAAFRRGVPGIPGYQNCHLRTESNILDQL HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCCCCEEECHHHHHHHH RHRIAGLYRLLNVIQGLTGGYGPESLLYWYRHIKYLNEVRLWGEQACEGWALGGLWWLEP HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECH EDLLLLLWHMYHDGMLSGRNNWLHVFGVTDARMVAIFSLIQKALRYELRDPKFTISCDSS HHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC NPTKNMGKGGSRYLGTGNVVATQRLPDSSLKKDGAHRFPLLFAEGKVFPYTTAVPFSGFT CCCCCCCCCCCEEECCCCEEEECCCCCHHHHCCCCCCCCEEEECCEEEEEEEECCCCCCC PWQISATEDLLKGTVLEGTPLHSAYILQGDKANGGLNPLGQMAMAFVNTEAFLRQTYSVV CEEECCHHHHHCCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DRYFVANERNLVPLIVQMLRSNRPEQWLPLIAFP HHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA