| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312733
Identifier: 83312733
GI number: 83312733
Start: 3994980
End: 3995981
Strand: Reverse
Name: 83312733
Synonym: amb3634
Alternate gene names: NA
Gene position: 3995981-3994980 (Counterclockwise)
Preceding gene: 162319780
Following gene: 83312731
Centisome position: 80.45
GC content: 65.97
Gene sequence:
>1002_bases GTGGATGTGCGCCCATCCGAGGTGATTTCCGACCTGCCGCCGCCGCTCCGTCCCCATTTGGGATTGGCGCTGCAAGGCGG CGGTGCCTATGGCGCCTTCACCTGGGGCGTGCTGGACCGGCTGCTGGAGGAAAAGGGCTTCCGGCCCGCCGCCATCAGCG GCGCCAGCGCCGGGGCGATCAATGCCGCGGTCATGGTCACCGGCCTGCTGACCGGCGGGCGGGAGAAAGCCAAGGCCGGG CTCGAGGCGCTGTGGCGCAGCGTGGCCGGCATGGCCCTATTCCGCATGATGGGGACGCCTGGGATCAATCTGCAACTGGA TCTGATGACCCGGATGCTCTCGCCCTATCAGTTCAATCCTCTCAACATCAATCCGCTGCGCGAGTTGCTGGGACGGTTGA TTGACTTCGAGGTCCTGGCCTGCAGGGGCCGGCGCATCGGGTTGTATTTCTCGGCCACCAACGTGCGCACCGGGGAGCCG CGCATCTTCCGCGAGAACGAGCTTTCCGTGGATGTCCTGATGGCCTCGTCCTGCCTGCCCTATCTTCACCATGCTGTGGA GATCGAGGGCGAGAACTACTGGGACGGGGGTTTTTCGGCCAATCCTCCGATCATGCCCATGATCTTCGACAGCCGGTGCG ACACGGTTCTGCTGGTCAAGCTGATGCCCGACACCGAGGAGATCATGCCGACCCAGGCCCAGCCCATCTTCGCCCGCATG CGCCGGCTGATGTTCAACGCTCCGCTGAAGCGCGACCTGGAAGCCCTGGAGATCGTCCAGAACCGTCTGCGGCGGACCAA TATGCGCCTGCCGCGTGATCTGCAGCGGCTGCGGGCCATGGACCTGCGCAGCATCGCCATGCCGGCCGAGCTGCTGAGCG AGGGGAGCGGGCGCAATGGCGCCGAATCCATCGAGCGGATGCGCGTCGCCGGGCGCATCGCCGCCGAGGCCATTCTCGGG AAAATGGCTCAGCCCGCGGGGGAAACGTTCAGGCGGCCGTAA
Upstream 100 bases:
>100_bases CTGTATAATCCAAGAGCCGCCTTACCTATAACGGGATATTCCCGTATGCGGTGCAACGCCGCACGGCTTCGCCTGCGGCG CAGCCTGTGGGGGATTGCGC
Downstream 100 bases:
>100_bases TATTCGACCAGGGCCTTGCGGGTGGTCTCCTCATTATAGCGCAGGGCCGTTTCATGCCCTTCTTTTCGGAGCGAGGCCAC CCAGGGCTCGTCTCTTTCCA
Product: alpha-beta hydrolase family esterase
Products: NA
Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Phospholipase Patatin Family; Esterase Of Alpha-Beta Hydrolase Superfamily; Serine Protease; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Patatin-Like Phospholipase; FabD/Lysophospholipase; Esterase; Alpha/Beta Fold Family Hydrolase; Phospholipase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MDVRPSEVISDLPPPLRPHLGLALQGGGAYGAFTWGVLDRLLEEKGFRPAAISGASAGAINAAVMVTGLLTGGREKAKAG LEALWRSVAGMALFRMMGTPGINLQLDLMTRMLSPYQFNPLNINPLRELLGRLIDFEVLACRGRRIGLYFSATNVRTGEP RIFRENELSVDVLMASSCLPYLHHAVEIEGENYWDGGFSANPPIMPMIFDSRCDTVLLVKLMPDTEEIMPTQAQPIFARM RRLMFNAPLKRDLEALEIVQNRLRRTNMRLPRDLQRLRAMDLRSIAMPAELLSEGSGRNGAESIERMRVAGRIAAEAILG KMAQPAGETFRRP
Sequences:
>Translated_333_residues MDVRPSEVISDLPPPLRPHLGLALQGGGAYGAFTWGVLDRLLEEKGFRPAAISGASAGAINAAVMVTGLLTGGREKAKAG LEALWRSVAGMALFRMMGTPGINLQLDLMTRMLSPYQFNPLNINPLRELLGRLIDFEVLACRGRRIGLYFSATNVRTGEP RIFRENELSVDVLMASSCLPYLHHAVEIEGENYWDGGFSANPPIMPMIFDSRCDTVLLVKLMPDTEEIMPTQAQPIFARM RRLMFNAPLKRDLEALEIVQNRLRRTNMRLPRDLQRLRAMDLRSIAMPAELLSEGSGRNGAESIERMRVAGRIAAEAILG KMAQPAGETFRRP >Mature_333_residues MDVRPSEVISDLPPPLRPHLGLALQGGGAYGAFTWGVLDRLLEEKGFRPAAISGASAGAINAAVMVTGLLTGGREKAKAG LEALWRSVAGMALFRMMGTPGINLQLDLMTRMLSPYQFNPLNINPLRELLGRLIDFEVLACRGRRIGLYFSATNVRTGEP RIFRENELSVDVLMASSCLPYLHHAVEIEGENYWDGGFSANPPIMPMIFDSRCDTVLLVKLMPDTEEIMPTQAQPIFARM RRLMFNAPLKRDLEALEIVQNRLRRTNMRLPRDLQRLRAMDLRSIAMPAELLSEGSGRNGAESIERMRVAGRIAAEAILG KMAQPAGETFRRP
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36884; Mature: 36884
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRPSEVISDLPPPLRPHLGLALQGGGAYGAFTWGVLDRLLEEKGFRPAAISGASAGAI CCCCHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH NAAVMVTGLLTGGREKAKAGLEALWRSVAGMALFRMMGTPGINLQLDLMTRMLSPYQFNP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCC LNINPLRELLGRLIDFEVLACRGRRIGLYFSATNVRTGEPRIFRENELSVDVLMASSCLP CCHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHH YLHHAVEIEGENYWDGGFSANPPIMPMIFDSRCDTVLLVKLMPDTEEIMPTQAQPIFARM HHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCHHHHHH RRLMFNAPLKRDLEALEIVQNRLRRTNMRLPRDLQRLRAMDLRSIAMPAELLSEGSGRNG HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCH AESIERMRVAGRIAAEAILGKMAQPAGETFRRP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MDVRPSEVISDLPPPLRPHLGLALQGGGAYGAFTWGVLDRLLEEKGFRPAAISGASAGAI CCCCHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH NAAVMVTGLLTGGREKAKAGLEALWRSVAGMALFRMMGTPGINLQLDLMTRMLSPYQFNP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCCC LNINPLRELLGRLIDFEVLACRGRRIGLYFSATNVRTGEPRIFRENELSVDVLMASSCLP CCHHHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHH YLHHAVEIEGENYWDGGFSANPPIMPMIFDSRCDTVLLVKLMPDTEEIMPTQAQPIFARM HHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHCCCCCCHHHHHH RRLMFNAPLKRDLEALEIVQNRLRRTNMRLPRDLQRLRAMDLRSIAMPAELLSEGSGRNG HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCH AESIERMRVAGRIAAEAILGKMAQPAGETFRRP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA