Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83312727

Identifier: 83312727

GI number: 83312727

Start: 3988969

End: 3989442

Strand: Reverse

Name: 83312727

Synonym: amb3628

Alternate gene names: NA

Gene position: 3989442-3988969 (Counterclockwise)

Preceding gene: 83312728

Following gene: 83312725

Centisome position: 80.32

GC content: 65.4

Gene sequence:

>474_bases
GTGAATGTCTTCTTTCTCGATCGCGATCCCGTCAGTGCCGCCCGCCTGCATTCCGATCAGCATGTGGTGAAGATGGTGCT
GGAAACGGCGCAGATTCTTTGCGCCGTGCTGCACCGCTACGGCATCGCCTCGCCCTATCGCCCCACCCATGCCCGCCATC
CGTGCGTGTTGTGGACCGGCGACAGCCTGGCCCATTGGCAATGGGTGCGGGCCTTGGGGCTGGCCCTGGGCGAGGAATAT
ACTCACCGGCGGGGCCGGGTTCATGCCTCGGCCGAGGTGATTGCCGGATTGCCGCCCTTGCCGCCCATTCCCGACAATGG
CTGGACGGAACCGCCACAGGCCATGCCGGAAGCCTATCATGGCCCCGATCCGGTGGAGGCCTATCGCCGCTATTACCGGG
CGGAGAAGTCGGTGTTTCCTGGCAAGGGACCCGCCACCTGGAGCCTGCGTGAGACGCCCGGCTTCATGGGCTGA

Upstream 100 bases:

>100_bases
CGGCGGCACCGTCAGCCGCGAATGGATCGAAGCCGCCCGCTTCCCCGATATCTTCGCCCAGGCGGCCTGATATCGTTTCC
GGGCGGGGAGGGATGCGGCC

Downstream 100 bases:

>100_bases
GCGCCTTGTCGATGGCGGCGCGCAGGCGTTCGGCGTCGGGCGCCGTGGTGCTGGCGAACCAGTCGACCATTCCTCCGTCG
CGGCCCACCAGGATCTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNVFFLDRDPVSAARLHSDQHVVKMVLETAQILCAVLHRYGIASPYRPTHARHPCVLWTGDSLAHWQWVRALGLALGEEY
THRRGRVHASAEVIAGLPPLPPIPDNGWTEPPQAMPEAYHGPDPVEAYRRYYRAEKSVFPGKGPATWSLRETPGFMG

Sequences:

>Translated_157_residues
MNVFFLDRDPVSAARLHSDQHVVKMVLETAQILCAVLHRYGIASPYRPTHARHPCVLWTGDSLAHWQWVRALGLALGEEY
THRRGRVHASAEVIAGLPPLPPIPDNGWTEPPQAMPEAYHGPDPVEAYRRYYRAEKSVFPGKGPATWSLRETPGFMG
>Mature_157_residues
MNVFFLDRDPVSAARLHSDQHVVKMVLETAQILCAVLHRYGIASPYRPTHARHPCVLWTGDSLAHWQWVRALGLALGEEY
THRRGRVHASAEVIAGLPPLPPIPDNGWTEPPQAMPEAYHGPDPVEAYRRYYRAEKSVFPGKGPATWSLRETPGFMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17628; Mature: 17628

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFFLDRDPVSAARLHSDQHVVKMVLETAQILCAVLHRYGIASPYRPTHARHPCVLWTG
CEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC
DSLAHWQWVRALGLALGEEYTHRRGRVHASAEVIAGLPPLPPIPDNGWTEPPQAMPEAYH
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC
GPDPVEAYRRYYRAEKSVFPGKGPATWSLRETPGFMG
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MNVFFLDRDPVSAARLHSDQHVVKMVLETAQILCAVLHRYGIASPYRPTHARHPCVLWTG
CEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC
DSLAHWQWVRALGLALGEEYTHRRGRVHASAEVIAGLPPLPPIPDNGWTEPPQAMPEAYH
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC
GPDPVEAYRRYYRAEKSVFPGKGPATWSLRETPGFMG
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA