| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312674
Identifier: 83312674
GI number: 83312674
Start: 3927985
End: 3929280
Strand: Reverse
Name: 83312674
Synonym: amb3575
Alternate gene names: NA
Gene position: 3929280-3927985 (Counterclockwise)
Preceding gene: 83312675
Following gene: 83312673
Centisome position: 79.11
GC content: 69.29
Gene sequence:
>1296_bases ATGTTTCCCGGCAGCTTCATGATGGGGGCGAAGGATCGCCTCCTGCCTCCGTCCATCCCCTACCGCTTCTTCGTGGCGGC GGTGTTCTTCCACCTGCTGGCCTGGGTGCTGCTGCTGGTCGGCAACGAGGGCGTGATCGGCTTCGTCGGCGGCCAGGGCA TGACCCTGGCGGCGCTGCATCTGATCACCCTGGGCACCCTGGCCATGACCGCCATGGGCGCCGCCATCCAATTGCTGCCG GTGGCGACGCGCCGGCCGCTGGGTCCCATCTGGGCCATCAAGCTGATGTTCATCCTTTATGCCCCCGGCGTGGCGCTGTT CGCCGGCGGCCTCGCCCATTCCATCCCCTGGGCCCAGCATGGCGGCGCGACGCTCTGTGTCGCCGGCCTGGCCCTGTTCG GCGGGCTGGTGGGGGCCAATCTGCGCAAGGTCGACGATCTGCCCGGCGTCACCCGTCATGCCTGGCTGGCGGTGGCGTCG CTGATCGGTCTGGCCGTCCTCGGGCTGGTTCTGGTGGTGGATTTCACCAAGGGCTTCCTGCCCGACCACGCCTCGGTGGC GGCGGCCCACGCCGTGCTGGCCGGCTACGGCTTCATGGGCATGCTGGCGCTGGGCTTTTCCTATGTGCTGATCCCCATGT TCGTGCTGGGCTCGGCGGTTCCCGACGTGGTGGGCAAGCGGACGGCGCTGCTGTCGGGGCTTGGACTGGCGCTGGGCGCC GGTGGCGCGCTGACCGGCCAGGGGCTGGTGGCGGCGCTGGGCATCCTTCTGGGGCTGGCGGCCTGCGGCGTCTACCTGCA CGGCATGCGGGCCAGCTTGAAGAGCCGCATGAAGAAGCGCCTGGAGCCGTTCTTCCGCGTGGTATGGGTCGCCTGGGCGC TGCTGCCCGTCAGCCTGCTGGCCGGGCTGGCCCCGGCCCTGGGGGCGCCGCTCGACCCCTGGGCGAGCCTGTGGGGATTT TTGCTGGTTTTCGGCTGGCTCTTGTCCTTCGTCACGGCGATCCTCCAGCGGATCATGCCATTTCTGGCCTCCATGCATTC CTCGGCCCTGGGCGGCAAGCCGGCATTGCTGTCGCACCTGTCGCCCAAACTGCCGGTGGATATTCATCTGGGCTGCCACG CGGCGGCCCTGGTTCTGGTTTGCGTCGCCCTGATCGGCGGCTGGGTCTGGCCGCTGCGGCTGGGCCTGATCGCCGGTCTG GTCGGCGCGGTCGCCTTCGGTGTCTACACCGTGGAGGTGCTGCGCCGGTATCGTTCCCACATGGCCGCCGCCGCCGCGGC CCATCAACAAGGATAA
Upstream 100 bases:
>100_bases CCCATTTCCTCGCTCCGGAACTGGCCGAGCGCGGCTGGCGCATCGCCCGGGTCTCGACCGAGGTCGTCAATGTCAGGCTG TGGCTGGAGCGGGAAAGCTG
Downstream 100 bases:
>100_bases GCGTCCCATGAACACCCAGACCGGCGCCCTGCTGCATCAGGCCCACATGACCACCATCGAGGCCCTGCAGTCGCTGGACG AGATGCTCGGCTCCAACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MFPGSFMMGAKDRLLPPSIPYRFFVAAVFFHLLAWVLLLVGNEGVIGFVGGQGMTLAALHLITLGTLAMTAMGAAIQLLP VATRRPLGPIWAIKLMFILYAPGVALFAGGLAHSIPWAQHGGATLCVAGLALFGGLVGANLRKVDDLPGVTRHAWLAVAS LIGLAVLGLVLVVDFTKGFLPDHASVAAAHAVLAGYGFMGMLALGFSYVLIPMFVLGSAVPDVVGKRTALLSGLGLALGA GGALTGQGLVAALGILLGLAACGVYLHGMRASLKSRMKKRLEPFFRVVWVAWALLPVSLLAGLAPALGAPLDPWASLWGF LLVFGWLLSFVTAILQRIMPFLASMHSSALGGKPALLSHLSPKLPVDIHLGCHAAALVLVCVALIGGWVWPLRLGLIAGL VGAVAFGVYTVEVLRRYRSHMAAAAAAHQQG
Sequences:
>Translated_431_residues MFPGSFMMGAKDRLLPPSIPYRFFVAAVFFHLLAWVLLLVGNEGVIGFVGGQGMTLAALHLITLGTLAMTAMGAAIQLLP VATRRPLGPIWAIKLMFILYAPGVALFAGGLAHSIPWAQHGGATLCVAGLALFGGLVGANLRKVDDLPGVTRHAWLAVAS LIGLAVLGLVLVVDFTKGFLPDHASVAAAHAVLAGYGFMGMLALGFSYVLIPMFVLGSAVPDVVGKRTALLSGLGLALGA GGALTGQGLVAALGILLGLAACGVYLHGMRASLKSRMKKRLEPFFRVVWVAWALLPVSLLAGLAPALGAPLDPWASLWGF LLVFGWLLSFVTAILQRIMPFLASMHSSALGGKPALLSHLSPKLPVDIHLGCHAAALVLVCVALIGGWVWPLRLGLIAGL VGAVAFGVYTVEVLRRYRSHMAAAAAAHQQG >Mature_431_residues MFPGSFMMGAKDRLLPPSIPYRFFVAAVFFHLLAWVLLLVGNEGVIGFVGGQGMTLAALHLITLGTLAMTAMGAAIQLLP VATRRPLGPIWAIKLMFILYAPGVALFAGGLAHSIPWAQHGGATLCVAGLALFGGLVGANLRKVDDLPGVTRHAWLAVAS LIGLAVLGLVLVVDFTKGFLPDHASVAAAHAVLAGYGFMGMLALGFSYVLIPMFVLGSAVPDVVGKRTALLSGLGLALGA GGALTGQGLVAALGILLGLAACGVYLHGMRASLKSRMKKRLEPFFRVVWVAWALLPVSLLAGLAPALGAPLDPWASLWGF LLVFGWLLSFVTAILQRIMPFLASMHSSALGGKPALLSHLSPKLPVDIHLGCHAAALVLVCVALIGGWVWPLRLGLIAGL VGAVAFGVYTVEVLRRYRSHMAAAAAAHQQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44806; Mature: 44806
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPGSFMMGAKDRLLPPSIPYRFFVAAVFFHLLAWVLLLVGNEGVIGFVGGQGMTLAALH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH LITLGTLAMTAMGAAIQLLPVATRRPLGPIWAIKLMFILYAPGVALFAGGLAHSIPWAQH HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC GGATLCVAGLALFGGLVGANLRKVDDLPGVTRHAWLAVASLIGLAVLGLVLVVDFTKGFL CCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDHASVAAAHAVLAGYGFMGMLALGFSYVLIPMFVLGSAVPDVVGKRTALLSGLGLALGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGALTGQGLVAALGILLGLAACGVYLHGMRASLKSRMKKRLEPFFRVVWVAWALLPVSLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAPALGAPLDPWASLWGFLLVFGWLLSFVTAILQRIMPFLASMHSSALGGKPALLSHL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC SPKLPVDIHLGCHAAALVLVCVALIGGWVWPLRLGLIAGLVGAVAFGVYTVEVLRRYRSH CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAAAAAAHQQG HHHHHHHHCCC >Mature Secondary Structure MFPGSFMMGAKDRLLPPSIPYRFFVAAVFFHLLAWVLLLVGNEGVIGFVGGQGMTLAALH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH LITLGTLAMTAMGAAIQLLPVATRRPLGPIWAIKLMFILYAPGVALFAGGLAHSIPWAQH HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC GGATLCVAGLALFGGLVGANLRKVDDLPGVTRHAWLAVASLIGLAVLGLVLVVDFTKGFL CCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDHASVAAAHAVLAGYGFMGMLALGFSYVLIPMFVLGSAVPDVVGKRTALLSGLGLALGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GGALTGQGLVAALGILLGLAACGVYLHGMRASLKSRMKKRLEPFFRVVWVAWALLPVSLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLAPALGAPLDPWASLWGFLLVFGWLLSFVTAILQRIMPFLASMHSSALGGKPALLSHL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC SPKLPVDIHLGCHAAALVLVCVALIGGWVWPLRLGLIAGLVGAVAFGVYTVEVLRRYRSH CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAAAAAAHQQG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA