| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is purU [H]
Identifier: 83312671
GI number: 83312671
Start: 3926091
End: 3926951
Strand: Reverse
Name: purU [H]
Synonym: amb3572
Alternate gene names: 83312671
Gene position: 3926951-3926091 (Counterclockwise)
Preceding gene: 83312673
Following gene: 83312669
Centisome position: 79.06
GC content: 64.34
Gene sequence:
>861_bases ATGGCCGACAAGCCCGCCTGGGTGCTGACCATCACTTGTCCCGATACTGTCGGGATCGTGGCCGCCGTATCGGGCTTTCT CAGCACCCATGACTGCTTCATTACCGAGGCGGCCCAGTTCGGCGATCCGCTGTCGTCGCGCTTCTTCATGCGCATCGTAT TCGGGGCGGGCGCCATGACGCCGCCCATGGCCGAGCTGGAAAAGCTGTTCACCGGGGTGGCCGCCCAGTTTCAGATGATC TGGAAGCTGCACGACGGCCGGCAGAAGGCCCGGGTGGTGATTCTGGTCTCCAAGTTCGGGCACTGCCTGAACGACCTGCT GCACCGCTATCACACCGGTTCGCTGCCCATCGAGATTCCGGCGGTGATCTCCAACCACCAGGAGATGCGCTCCATCGTCG AGTGGCACGGCATCCCCTATCACTACCTGGCGGTGGACAAGCACGACAAGCTGACCCAGGAAAACCGGGTGATGGAGGTG ATCGAACGCGCCGACGCCGACCTGGTGGTGCTGGCCCGCTACATGCAAATCCTGTCGACCGACATGTGCGTGCGGCTGCA GGGCAAGGCCATCAACATCCACCACTCGTTCCTGCCCAGCTTCAAGGGCGCCAAGCCCTATCACCAGGCCCATTCCCGCG GCGTGAAGATCATCGGCGCCACCGCCCATTACGTCACCCCCGACCTGGACGAGGGTCCCATCATCGAGCAGGGCGTCGAG CGCGTCGACCACACCCACACCCCCGACGATCTGGTGGCCATCGGCCGCGACATCGAGAACGTGGTGCTGGCCCGCGCCGT GCGCTGGCACACCGAGCATCGGGTGCTGCTCAACGGCTCGAAGACGGTGGTGTTCCGCTGA
Upstream 100 bases:
>100_bases CCGGACCTTCGGGCATTTGCGGCCAAAAGGCAAGGGCGGGATTGCCCATTGGGGCGGGGTCGGATAAACCCATGGGGTCA TTGCAACAAGGAGCCTGATC
Downstream 100 bases:
>100_bases CGCCAGCGCCCGGCGCGAGTCGTGACGATCCGTCGGCAAGGCCGACGGGGCCGTGCGCTGGCACACCGAGCATCGGGTGC TGCTCAACGGCTCGAAGACG
Product: formyltetrahydrofolate hydrolase
Products: NA
Alternate protein names: Formyl-FH(4) hydrolase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MADKPAWVLTITCPDTVGIVAAVSGFLSTHDCFITEAAQFGDPLSSRFFMRIVFGAGAMTPPMAELEKLFTGVAAQFQMI WKLHDGRQKARVVILVSKFGHCLNDLLHRYHTGSLPIEIPAVISNHQEMRSIVEWHGIPYHYLAVDKHDKLTQENRVMEV IERADADLVVLARYMQILSTDMCVRLQGKAINIHHSFLPSFKGAKPYHQAHSRGVKIIGATAHYVTPDLDEGPIIEQGVE RVDHTHTPDDLVAIGRDIENVVLARAVRWHTEHRVLLNGSKTVVFR
Sequences:
>Translated_286_residues MADKPAWVLTITCPDTVGIVAAVSGFLSTHDCFITEAAQFGDPLSSRFFMRIVFGAGAMTPPMAELEKLFTGVAAQFQMI WKLHDGRQKARVVILVSKFGHCLNDLLHRYHTGSLPIEIPAVISNHQEMRSIVEWHGIPYHYLAVDKHDKLTQENRVMEV IERADADLVVLARYMQILSTDMCVRLQGKAINIHHSFLPSFKGAKPYHQAHSRGVKIIGATAHYVTPDLDEGPIIEQGVE RVDHTHTPDDLVAIGRDIENVVLARAVRWHTEHRVLLNGSKTVVFR >Mature_285_residues ADKPAWVLTITCPDTVGIVAAVSGFLSTHDCFITEAAQFGDPLSSRFFMRIVFGAGAMTPPMAELEKLFTGVAAQFQMIW KLHDGRQKARVVILVSKFGHCLNDLLHRYHTGSLPIEIPAVISNHQEMRSIVEWHGIPYHYLAVDKHDKLTQENRVMEVI ERADADLVVLARYMQILSTDMCVRLQGKAINIHHSFLPSFKGAKPYHQAHSRGVKIIGATAHYVTPDLDEGPIIEQGVER VDHTHTPDDLVAIGRDIENVVLARAVRWHTEHRVLLNGSKTVVFR
Specific function: Produces Formate From Formyl-Tetrahydrofolate. Provides The Major Source Of Formate For The Purt-Dependent Synthesis Of 5'-Phosphoribosyl-N-Formylglycinamide (Fgar) During Aerobic Growth. Has A Role In Regulating The One-Carbon Pool. [C]
COG id: COG0788
COG function: function code F; Formyltetrahydrofolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=174, Percent_Identity=33.9080459770115, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI209869995, Length=174, Percent_Identity=33.9080459770115, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI209869993, Length=174, Percent_Identity=33.9080459770115, Blast_Score=89, Evalue=5e-18, Organism=Escherichia coli, GI1787483, Length=285, Percent_Identity=41.0526315789474, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1788846, Length=188, Percent_Identity=28.7234042553192, Blast_Score=75, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17567511, Length=163, Percent_Identity=34.3558282208589, Blast_Score=88, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR004810 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =3.5.1.10 [H]
Molecular weight: Translated: 32064; Mature: 31933
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKPAWVLTITCPDTVGIVAAVSGFLSTHDCFITEAAQFGDPLSSRFFMRIVFGAGAMT CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC PPMAELEKLFTGVAAQFQMIWKLHDGRQKARVVILVSKFGHCLNDLLHRYHTGSLPIEIP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEH AVISNHQEMRSIVEWHGIPYHYLAVDKHDKLTQENRVMEVIERADADLVVLARYMQILST HHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC DMCVRLQGKAINIHHSFLPSFKGAKPYHQAHSRGVKIIGATAHYVTPDLDEGPIIEQGVE CCEEEEECCEEEEEHHHCCCCCCCCCHHHHHHCCEEEEEEEEHEECCCCCCCCCHHHHHH RVDHTHTPDDLVAIGRDIENVVLARAVRWHTEHRVLLNGSKTVVFR HHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCEEEEEC >Mature Secondary Structure ADKPAWVLTITCPDTVGIVAAVSGFLSTHDCFITEAAQFGDPLSSRFFMRIVFGAGAMT CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC PPMAELEKLFTGVAAQFQMIWKLHDGRQKARVVILVSKFGHCLNDLLHRYHTGSLPIEIP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEH AVISNHQEMRSIVEWHGIPYHYLAVDKHDKLTQENRVMEVIERADADLVVLARYMQILST HHHCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC DMCVRLQGKAINIHHSFLPSFKGAKPYHQAHSRGVKIIGATAHYVTPDLDEGPIIEQGVE CCEEEEECCEEEEEHHHCCCCCCCCCHHHHHHCCEEEEEEEEHEECCCCCCCCCHHHHHH RVDHTHTPDDLVAIGRDIENVVLARAVRWHTEHRVLLNGSKTVVFR HHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7543100 [H]