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The map label for this gene is 83312628

Identifier: 83312628

GI number: 83312628

Start: 3878240

End: 3878809

Strand: Reverse

Name: 83312628

Synonym: amb3529

Alternate gene names: NA

Gene position: 3878809-3878240 (Counterclockwise)

Preceding gene: 83312629

Following gene: 83312627

Centisome position: 78.09

GC content: 74.04

Gene sequence:

>570_bases
ATGCATACAATCATCGTTGCCCTGATCGCCCTAGCCGTGTCGGCTCCCGCCCTGGCGGCGGGGCCGCCTCCCGCCGCCGC
CACGCCCGCTCCCGCCGCGCCAATGGCAGCGCCTGCGCCGCGCTGCGCCGAGGATGCCGAGGGCGGGGCCTGCGTCTGGG
GCAAGGCGGAGGGCTATGACGCCGGGGCGCTGCAGGTGCGCGGCCTGCATGTGGCCCTGGCGGGCGTTCTCGCCCCCGGG
CGCAAGGATCTGTGCGGCTCGAAATCGGCCAAGGAAGAATTCGACTGCGCCCGCCCGGCCAGGAAACGCATGGGCGAACT
GGTGGCCAGGGGCGTGGCCTGCGAGATCCTCGACGTGGCCTCGGGTCAGCTCTGGGGGCGCTGCAAGGTGGCCGAGGGCG
ATCTCGGACGGCTGCTGGTGAGCGCGGGGTTGGCCCGCGCCGCCAAGGACGGCCCCTATGCCGAGGCGCAGAAGCAGGCG
GTGACCGCCCGGCGCGGCCTGTGGGCCGCCGACATGGTGCTGCCCCGCGACTGGGAAACGGCGCGGCGCAAGGCCGAGGA
CGAGGAGTAG

Upstream 100 bases:

>100_bases
GCAGCTCAACCGCCGCCTGATCGAGCAACTGGACCGCTGCACCGCCTGTCACGCCGGCTTCAGGATCGACGTCAGCCAAT
AGGCGCGCTATCCTGGGAAA

Downstream 100 bases:

>100_bases
ATCACTCGGCCTTTTTGGCGCTCTTTTTCGGCTTCTTCTCGGCTTCGGCCTTGGGTTCGGCGCAGGGGCTGATGTCGGCG
GGCCGGCCCACCGTCTCCCC

Product: micrococcal nuclease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MHTIIVALIALAVSAPALAAGPPPAAATPAPAAPMAAPAPRCAEDAEGGACVWGKAEGYDAGALQVRGLHVALAGVLAPG
RKDLCGSKSAKEEFDCARPARKRMGELVARGVACEILDVASGQLWGRCKVAEGDLGRLLVSAGLARAAKDGPYAEAQKQA
VTARRGLWAADMVLPRDWETARRKAEDEE

Sequences:

>Translated_189_residues
MHTIIVALIALAVSAPALAAGPPPAAATPAPAAPMAAPAPRCAEDAEGGACVWGKAEGYDAGALQVRGLHVALAGVLAPG
RKDLCGSKSAKEEFDCARPARKRMGELVARGVACEILDVASGQLWGRCKVAEGDLGRLLVSAGLARAAKDGPYAEAQKQA
VTARRGLWAADMVLPRDWETARRKAEDEE
>Mature_189_residues
MHTIIVALIALAVSAPALAAGPPPAAATPAPAAPMAAPAPRCAEDAEGGACVWGKAEGYDAGALQVRGLHVALAGVLAPG
RKDLCGSKSAKEEFDCARPARKRMGELVARGVACEILDVASGQLWGRCKVAEGDLGRLLVSAGLARAAKDGPYAEAQKQA
VTARRGLWAADMVLPRDWETARRKAEDEE

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19472; Mature: 19472

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTIIVALIALAVSAPALAAGPPPAAATPAPAAPMAAPAPRCAEDAEGGACVWGKAEGYD
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
AGALQVRGLHVALAGVLAPGRKDLCGSKSAKEEFDCARPARKRMGELVARGVACEILDVA
CCCEEECHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGQLWGRCKVAEGDLGRLLVSAGLARAAKDGPYAEAQKQAVTARRGLWAADMVLPRDWET
CCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHH
ARRKAEDEE
HHHCCCCCC
>Mature Secondary Structure
MHTIIVALIALAVSAPALAAGPPPAAATPAPAAPMAAPAPRCAEDAEGGACVWGKAEGYD
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
AGALQVRGLHVALAGVLAPGRKDLCGSKSAKEEFDCARPARKRMGELVARGVACEILDVA
CCCEEECHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SGQLWGRCKVAEGDLGRLLVSAGLARAAKDGPYAEAQKQAVTARRGLWAADMVLPRDWET
CCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHH
ARRKAEDEE
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA