| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312519
Identifier: 83312519
GI number: 83312519
Start: 3716039
End: 3716422
Strand: Reverse
Name: 83312519
Synonym: amb3420
Alternate gene names: NA
Gene position: 3716422-3716039 (Counterclockwise)
Preceding gene: 83312520
Following gene: 83312518
Centisome position: 74.82
GC content: 64.06
Gene sequence:
>384_bases ATGGCACTCGATAAAGGCGCGGCCGAGGACAACAAAAGGCTGTTTCCCAGGCAGCGATGCGGTACCGAGTGCACCTTTGT GCTCGATGGCATGGAAAGCCGTGCTTATTTGCTGGATGCGTCCCGCGGCGGGTTCAAGCTGCGATTCGACCTCGCTGATG CCGCCATGGCCGCCATGACCCCGCTGCCGCGCGACATGGTCGTCGCCGACCAGTATTCGAAGATGCATGCGACCATCATG TGGGCCAGTGCTGGGCTGGCCGGCTGTCGCTTCTATCAGCACCTGTCCCTGGATGACGTGGTGCGCGTGATGACCGGACA TTTCCGCCTGCAACTGGTGCCGCCGCCCGAGCCAGAGGCGGAACGGCCGCCGCCGGCGGCATGA
Upstream 100 bases:
>100_bases CCCTTCCTGCCAAGGGGGGAGCCGGGGGCTTTGTTTATGGAAACTTATTAATCCGTGCGCCATAATATCAAGGGGTTAAG AGGATAGGCGGGAGGGTGCC
Downstream 100 bases:
>100_bases CGGAAGGGGCCGCGCCGCGTTCCGGCTATTCATTGCCGATTTCGTGACATATCATGGGGGCCGGTGAAACGCTTATGGGG CATGGTCATGGCATCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MALDKGAAEDNKRLFPRQRCGTECTFVLDGMESRAYLLDASRGGFKLRFDLADAAMAAMTPLPRDMVVADQYSKMHATIM WASAGLAGCRFYQHLSLDDVVRVMTGHFRLQLVPPPEPEAERPPPAA
Sequences:
>Translated_127_residues MALDKGAAEDNKRLFPRQRCGTECTFVLDGMESRAYLLDASRGGFKLRFDLADAAMAAMTPLPRDMVVADQYSKMHATIM WASAGLAGCRFYQHLSLDDVVRVMTGHFRLQLVPPPEPEAERPPPAA >Mature_126_residues ALDKGAAEDNKRLFPRQRCGTECTFVLDGMESRAYLLDASRGGFKLRFDLADAAMAAMTPLPRDMVVADQYSKMHATIMW ASAGLAGCRFYQHLSLDDVVRVMTGHFRLQLVPPPEPEAERPPPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14056; Mature: 13925
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDKGAAEDNKRLFPRQRCGTECTFVLDGMESRAYLLDASRGGFKLRFDLADAAMAAMT CCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEEEECCCCCEEEEEEHHHHHHHHHC PLPRDMVVADQYSKMHATIMWASAGLAGCRFYQHLSLDDVVRVMTGHFRLQLVPPPEPEA CCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCC ERPPPAA CCCCCCC >Mature Secondary Structure ALDKGAAEDNKRLFPRQRCGTECTFVLDGMESRAYLLDASRGGFKLRFDLADAAMAAMT CCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEEEECCCCCEEEEEEHHHHHHHHHC PLPRDMVVADQYSKMHATIMWASAGLAGCRFYQHLSLDDVVRVMTGHFRLQLVPPPEPEA CCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCC ERPPPAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA