| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is acrR [C]
Identifier: 83312513
GI number: 83312513
Start: 3710724
End: 3711251
Strand: Reverse
Name: acrR [C]
Synonym: amb3414
Alternate gene names: 83312513
Gene position: 3711251-3710724 (Counterclockwise)
Preceding gene: 83312514
Following gene: 83312512
Centisome position: 74.72
GC content: 65.34
Gene sequence:
>528_bases ATGAGCACCCGCGACAAGATCATCGATTCCGCCATGGCCATCGTGCGCGACCAGGGGGTGGCCAAGCTGACCCTGGACGC GGCCGCCAAGGAGGCGGGCATCAGCAAGGGCGGCGTTCTCTATCATTTCAAGAGCAAGGACGATCTGATCCGCGGCATGG TCCAGCGTCTGATCGACCAGTGCGATCAGCTCAACCGCGAGCATTACGAGCATCAGCCGGAAGGTCCCTATCGCTGGGCC CGGACCCTGGTGAACGCCTGCTTCGACCCCAACGGCCCGGCCTTCGATCCGGTGGGCGGCGCCCTGCTGGCCGCCGTCAC CGTTAATCCAGACCTGGTCGCCCCCATCCAGGCTATGTACGACCGCTGGATGGAGCGCATCAAGAGCGACAGTCCCGACC TGCAGCGGGCCGGGCTGATCTGCACCGCCATGGACGGCGTCTATTTCCAGCGCCTGATGGGGATCAACCTCAGCGACGCC GAGGGGGCCGAGCGCCTCAAGCGGCACGCCCTCGACCTTCTGCAGTAA
Upstream 100 bases:
>100_bases ATAGCGCCGGCCGCATCCCCCCTATGCGTCCGTACGACTGGACTCATCAGTTCACTTTACTATACCGTCCAGCCGGTACA GTAAGGGGCCTGAATTCGCA
Downstream 100 bases:
>100_bases CGGAGCCTACGCCATGAAAGCCAAACGGATGATCATCATGCTGGCGGGCTCTGCCATCGTGTTCGGAGGAGTCTTCGGCT TCGTCGCCTTCAAGAACCAC
Product: transcriptional regulator
Products: NA
Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSTRDKIIDSAMAIVRDQGVAKLTLDAAAKEAGISKGGVLYHFKSKDDLIRGMVQRLIDQCDQLNREHYEHQPEGPYRWA RTLVNACFDPNGPAFDPVGGALLAAVTVNPDLVAPIQAMYDRWMERIKSDSPDLQRAGLICTAMDGVYFQRLMGINLSDA EGAERLKRHALDLLQ
Sequences:
>Translated_175_residues MSTRDKIIDSAMAIVRDQGVAKLTLDAAAKEAGISKGGVLYHFKSKDDLIRGMVQRLIDQCDQLNREHYEHQPEGPYRWA RTLVNACFDPNGPAFDPVGGALLAAVTVNPDLVAPIQAMYDRWMERIKSDSPDLQRAGLICTAMDGVYFQRLMGINLSDA EGAERLKRHALDLLQ >Mature_174_residues STRDKIIDSAMAIVRDQGVAKLTLDAAAKEAGISKGGVLYHFKSKDDLIRGMVQRLIDQCDQLNREHYEHQPEGPYRWAR TLVNACFDPNGPAFDPVGGALLAAVTVNPDLVAPIQAMYDRWMERIKSDSPDLQRAGLICTAMDGVYFQRLMGINLSDAE GAERLKRHALDLLQ
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19426; Mature: 19295
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRDKIIDSAMAIVRDQGVAKLTLDAAAKEAGISKGGVLYHFKSKDDLIRGMVQRLIDQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHH CDQLNREHYEHQPEGPYRWARTLVNACFDPNGPAFDPVGGALLAAVTVNPDLVAPIQAMY HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHH DRWMERIKSDSPDLQRAGLICTAMDGVYFQRLMGINLSDAEGAERLKRHALDLLQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure STRDKIIDSAMAIVRDQGVAKLTLDAAAKEAGISKGGVLYHFKSKDDLIRGMVQRLIDQ CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHH CDQLNREHYEHQPEGPYRWARTLVNACFDPNGPAFDPVGGALLAAVTVNPDLVAPIQAMY HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHH DRWMERIKSDSPDLQRAGLICTAMDGVYFQRLMGINLSDAEGAERLKRHALDLLQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA