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The map label for this gene is torR [H]

Identifier: 83312500

GI number: 83312500

Start: 3694008

End: 3694514

Strand: Reverse

Name: torR [H]

Synonym: amb3401

Alternate gene names: 83312500

Gene position: 3694514-3694008 (Counterclockwise)

Preceding gene: 83312501

Following gene: 83312491

Centisome position: 74.38

GC content: 67.85

Gene sequence:

>507_bases
ATGACACCCGCCCACATTCTGGTGGTGGACGACGATGCCACCGTCCGCTCGATTCTTTCCGGCATCCTGACCGCCCAGGG
GTACCGCGTCACTCCCTGTGGCGGCGGAGAGGAGATGTGGGCGGCCCTGGCCGCCGGTCCCGCCGATCTGGTGCTTCTTG
ACGTGGAGATGCCGGGCGAGGACGGCTATACCCTGGTCCAGCGCCTGCGCGAGCGTTTCGCCCTGGGCATCATCCTGCTG
ACCGGTCACACGGCCCTGGAGCACAAGCTGCACGGTCTGGAAATCGGTGCCGACGAATTCCTGAGCAAGCCGTGCGACCG
GCGCGAATTGCTGGCCCGTATCAAGTCGCTGCTGCGGCGGGTGCCGTCGGTTCCGGTCAGAACGCCGCCCAAGCGCCCGA
CCTCCTGCCCCGTCTGCGGCAGCCGGGTGCGCTATTCCCTGGAGACCGAAGCCGGAGCCGTGGGGTCGTGCCGCGCCTGC
AGCTGGTCGAAGTTCTACGAGGGGTAG

Upstream 100 bases:

>100_bases
AAACTCCTACGAGCACCGCCGTGACGGGCGAGGCGAGCGGGAAAATCCGGGTCGTGGCAACAAGAACCGCGACGACTAGC
CAGGGCTCTTTCGACCGTTC

Downstream 100 bases:

>100_bases
AGCAACTCAAGGGCGGGCTGCCGCCCGCACCCGCCCGGGGCGATGCCCCGGTCCCCCTTTGATTTCATGAAGAAGCAAAA
GAGAGGTTTGGAGACCTCGT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTPAHILVVDDDATVRSILSGILTAQGYRVTPCGGGEEMWAALAAGPADLVLLDVEMPGEDGYTLVQRLRERFALGIILL
TGHTALEHKLHGLEIGADEFLSKPCDRRELLARIKSLLRRVPSVPVRTPPKRPTSCPVCGSRVRYSLETEAGAVGSCRAC
SWSKFYEG

Sequences:

>Translated_168_residues
MTPAHILVVDDDATVRSILSGILTAQGYRVTPCGGGEEMWAALAAGPADLVLLDVEMPGEDGYTLVQRLRERFALGIILL
TGHTALEHKLHGLEIGADEFLSKPCDRRELLARIKSLLRRVPSVPVRTPPKRPTSCPVCGSRVRYSLETEAGAVGSCRAC
SWSKFYEG
>Mature_167_residues
TPAHILVVDDDATVRSILSGILTAQGYRVTPCGGGEEMWAALAAGPADLVLLDVEMPGEDGYTLVQRLRERFALGIILLT
GHTALEHKLHGLEIGADEFLSKPCDRRELLARIKSLLRRVPSVPVRTPPKRPTSCPVCGSRVRYSLETEAGAVGSCRACS
WSKFYEG

Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Phosphorylated torR activates the transcription of the torCAD operon by binding to four decameric boxes located in the torCAD p

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787229, Length=161, Percent_Identity=33.5403726708075, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1790863, Length=132, Percent_Identity=36.3636363636364, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1789809, Length=116, Percent_Identity=43.1034482758621, Blast_Score=93, Evalue=9e-21,
Organism=Escherichia coli, GI1788394, Length=115, Percent_Identity=37.3913043478261, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI1786784, Length=124, Percent_Identity=35.4838709677419, Blast_Score=78, Evalue=3e-16,
Organism=Escherichia coli, GI1790552, Length=119, Percent_Identity=37.8151260504202, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786599, Length=124, Percent_Identity=33.0645161290323, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=34.2342342342342, Blast_Score=70, Evalue=5e-14,
Organism=Escherichia coli, GI2367329, Length=115, Percent_Identity=40, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787375, Length=129, Percent_Identity=31.0077519379845, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1789402, Length=116, Percent_Identity=33.6206896551724, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI87082012, Length=116, Percent_Identity=31.8965517241379, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1786911, Length=116, Percent_Identity=32.7586206896552, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=100, Percent_Identity=40, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1790437, Length=136, Percent_Identity=29.4117647058824, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1790860, Length=130, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 18229; Mature: 18098

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAHILVVDDDATVRSILSGILTAQGYRVTPCGGGEEMWAALAAGPADLVLLDVEMPGE
CCCCEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCCCEEEEEEEECCCC
DGYTLVQRLRERFALGIILLTGHTALEHKLHGLEIGADEFLSKPCDRRELLARIKSLLRR
CCHHHHHHHHHHHHHEEEEEECCHHHHHHHCCCEECHHHHHCCCCCHHHHHHHHHHHHHH
VPSVPVRTPPKRPTSCPVCGSRVRYSLETEAGAVGSCRACSWSKFYEG
CCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TPAHILVVDDDATVRSILSGILTAQGYRVTPCGGGEEMWAALAAGPADLVLLDVEMPGE
CCCEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCCCEEEEEEEECCCC
DGYTLVQRLRERFALGIILLTGHTALEHKLHGLEIGADEFLSKPCDRRELLARIKSLLRR
CCHHHHHHHHHHHHHEEEEEECCHHHHHHHCCCEECHHHHHCCCCCHHHHHHHHHHHHHH
VPSVPVRTPPKRPTSCPVCGSRVRYSLETEAGAVGSCRACSWSKFYEG
CCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]