Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83312434

Identifier: 83312434

GI number: 83312434

Start: 3627242

End: 3628576

Strand: Reverse

Name: 83312434

Synonym: amb3335

Alternate gene names: NA

Gene position: 3628576-3627242 (Counterclockwise)

Preceding gene: 83312435

Following gene: 83312433

Centisome position: 73.05

GC content: 59.03

Gene sequence:

>1335_bases
TTGAAGCGCATCAAAATTTCACTCGTCGCCATAGTACTCCTGCTGACTGCACTATGGTTGGCTGCCGATACCCTGTCCCC
GGAGCCATTCACCTATTTCTCGTTCCGTGGCGTATTTGTACAATACAGCGGGGTGCTCGGCATCGGCCTGATGAGTATCG
CAATGCTGCTGGCGCTGCGACCGAAATGGCTGGAGCCGCATCTGGACGGGCTGGACAAGATTTACCGCCTGCACAAGTGG
CTGGGTATCAGCGCTTTGGCGGTTTCCATCCTGCACTGGTGGTGGGCAAAAGGCACCAAGTGGATGGTCGGCTGGGGGTG
GCTGGAAAAACCCGCCCGCAAACCAAATGTTGACCAGACGCTCGGTGCCATTGAAGGCTGGCTGCGCAGCCAGCGGGGGC
TGGCTGAATCCATAGGCGAATGGGTGTTCTACGCCGCCGTGACTTTGATCGTTCTGGCCCTGGTCAAGCGCTTTCCCTAT
CACCTGTTCGTCAAGACCCACAAATGGCTAGCAGCAGCCTACCTGGCCCTGGCCTATCACTCTGCTGTGCTCACTAAATT
CGTCTACTGGACACAGCCGGTCGGCTGGGTGCTGGCAACTTTGCTGCTGGGCGGCAGCGTTGCCGCCGTGCTGACCCTGA
CAGGCCGCATCGGTGCCGGACGTAAAGTGCAGGGCACCATCGAGTCCCTGATCAACTACCCGGCCCTGCGCGTTCTCGAA
ACCACAGTCGTGCTGGATGACGGCTGGTGTGGCCATGCCGCCGGGCAATTCGCCTTCGTCACCTCCGACAAGAAAGAGGG
AGCCCACCCCTATACCATCGCTTCCGCCTGGAATCCGGCTGATCATCGCCTTACCTTCATCACCAAGGCGCTCGGCGATC
ACACCAGCCGTTTGCGGGAACGCTTGAAGATTGGCATGCCGGTGACGGTGGAAGGCCCTTACGGTTGCTTCGACTTTGAG
GATACGCAGTCACACCAGATCTGGATCGGCGCAGGCATCGGCATCACGCCCTTTGTCGCCCGTCTCAAGCATTGTGCGGC
CAATTCGGATAGCAAGACCATCGATTTGTTTCACCCGACAACCGAGTTCGATCAAACTGCCATTGACCGTCTAACAGCCG
ATGCCACTGCTGCCGGTGTACGCTTGCACCTCCTGGTCGATGGCAAGGGTGGACGACTGAACGGCGAACGCATCCGGGCT
GTGGTGCCGGAATGGCAGTCGGCCAGTTTTTGGTTCTGCGGCCCGCCCGGCTTTGGTCAGGCACTGCGAGAGAATTTCGT
TGCCAACGGCTTGCCGCCGGAACGTTTCCATCAGGAACTGTTTCAGATGCGTTGA

Upstream 100 bases:

>100_bases
GTTTACACAAAAACTCCTACACGCCCTTCGACGATTTCCGTATTGGTATATCGTTGACCACGTTGGGGAAGGTCATGGGG
CATTTCGTCGGAGTTCATTC

Downstream 100 bases:

>100_bases
TGACAAGCCGCTTGTTCAGGCACTTCGAGGCCGTGGGAATGGATCGTTCTGGATGCCGATTGCTGGATAAATACCTCCTT
GAGGAGGCCCCATGGATTCC

Product: ferric reductase

Products: NA

Alternate protein names: Ferric Reductase Domain-Containing Protein; Flavodoxin Oxidoreductase; Flavocytochrome; Ferric Reductase-Like Transmembrane Component-Like; Ferric Reductase; Ferric Reductase Domain Protein Transmembrane Component; Membrane Flavodoxin Oxidoreductase; Oxidoreductase Membrane Protein; Membrane-Bound Oxidoreductase; Ferredoxin; Flavocytochrome Protein; Hmp Protein; Ferric Reductase Like Transmembrane Component Family; Flavocytochrome Subuit Of Oxidoreductase

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALRPKWLEPHLDGLDKIYRLHKW
LGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQTLGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPY
HLFVKTHKWLAAAYLALAYHSAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE
TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRERLKIGMPVTVEGPYGCFDFE
DTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPTTEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRA
VVPEWQSASFWFCGPPGFGQALRENFVANGLPPERFHQELFQMR

Sequences:

>Translated_444_residues
MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALRPKWLEPHLDGLDKIYRLHKW
LGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQTLGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPY
HLFVKTHKWLAAAYLALAYHSAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE
TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRERLKIGMPVTVEGPYGCFDFE
DTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPTTEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRA
VVPEWQSASFWFCGPPGFGQALRENFVANGLPPERFHQELFQMR
>Mature_444_residues
MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALRPKWLEPHLDGLDKIYRLHKW
LGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQTLGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPY
HLFVKTHKWLAAAYLALAYHSAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE
TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRERLKIGMPVTVEGPYGCFDFE
DTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPTTEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRA
VVPEWQSASFWFCGPPGFGQALRENFVANGLPPERFHQELFQMR

Specific function: Unknown

COG id: COG4097

COG function: function code P; Predicted ferric reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49382; Mature: 49382

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALR
CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCC
PKWLEPHLDGLDKIYRLHKWLGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCCCHHHH
LGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPYHLFVKTHKWLAAAYLALAYH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH
SAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE
HHHHHHHHHHCCCHHHHHHHHHHCCCHHEEHEECCCCCCCCCHHHHHHHHHCCCHHHHEE
TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRE
EEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RLKIGMPVTVEGPYGCFDFEDTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPT
HHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCC
TEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRAVVPEWQSASFWFCGPPGFGQ
CHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCCCCHHHEEECCCCCCCCEEEECCCCHHH
ALRENFVANGLPPERFHQELFQMR
HHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALR
CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCC
PKWLEPHLDGLDKIYRLHKWLGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCCCHHHH
LGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPYHLFVKTHKWLAAAYLALAYH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH
SAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE
HHHHHHHHHHCCCHHHHHHHHHHCCCHHEEHEECCCCCCCCCHHHHHHHHHCCCHHHHEE
TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRE
EEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
RLKIGMPVTVEGPYGCFDFEDTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPT
HHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCC
TEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRAVVPEWQSASFWFCGPPGFGQ
CHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCCCCHHHEEECCCCCCCCEEEECCCCHHH
ALRENFVANGLPPERFHQELFQMR
HHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA