| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312434
Identifier: 83312434
GI number: 83312434
Start: 3627242
End: 3628576
Strand: Reverse
Name: 83312434
Synonym: amb3335
Alternate gene names: NA
Gene position: 3628576-3627242 (Counterclockwise)
Preceding gene: 83312435
Following gene: 83312433
Centisome position: 73.05
GC content: 59.03
Gene sequence:
>1335_bases TTGAAGCGCATCAAAATTTCACTCGTCGCCATAGTACTCCTGCTGACTGCACTATGGTTGGCTGCCGATACCCTGTCCCC GGAGCCATTCACCTATTTCTCGTTCCGTGGCGTATTTGTACAATACAGCGGGGTGCTCGGCATCGGCCTGATGAGTATCG CAATGCTGCTGGCGCTGCGACCGAAATGGCTGGAGCCGCATCTGGACGGGCTGGACAAGATTTACCGCCTGCACAAGTGG CTGGGTATCAGCGCTTTGGCGGTTTCCATCCTGCACTGGTGGTGGGCAAAAGGCACCAAGTGGATGGTCGGCTGGGGGTG GCTGGAAAAACCCGCCCGCAAACCAAATGTTGACCAGACGCTCGGTGCCATTGAAGGCTGGCTGCGCAGCCAGCGGGGGC TGGCTGAATCCATAGGCGAATGGGTGTTCTACGCCGCCGTGACTTTGATCGTTCTGGCCCTGGTCAAGCGCTTTCCCTAT CACCTGTTCGTCAAGACCCACAAATGGCTAGCAGCAGCCTACCTGGCCCTGGCCTATCACTCTGCTGTGCTCACTAAATT CGTCTACTGGACACAGCCGGTCGGCTGGGTGCTGGCAACTTTGCTGCTGGGCGGCAGCGTTGCCGCCGTGCTGACCCTGA CAGGCCGCATCGGTGCCGGACGTAAAGTGCAGGGCACCATCGAGTCCCTGATCAACTACCCGGCCCTGCGCGTTCTCGAA ACCACAGTCGTGCTGGATGACGGCTGGTGTGGCCATGCCGCCGGGCAATTCGCCTTCGTCACCTCCGACAAGAAAGAGGG AGCCCACCCCTATACCATCGCTTCCGCCTGGAATCCGGCTGATCATCGCCTTACCTTCATCACCAAGGCGCTCGGCGATC ACACCAGCCGTTTGCGGGAACGCTTGAAGATTGGCATGCCGGTGACGGTGGAAGGCCCTTACGGTTGCTTCGACTTTGAG GATACGCAGTCACACCAGATCTGGATCGGCGCAGGCATCGGCATCACGCCCTTTGTCGCCCGTCTCAAGCATTGTGCGGC CAATTCGGATAGCAAGACCATCGATTTGTTTCACCCGACAACCGAGTTCGATCAAACTGCCATTGACCGTCTAACAGCCG ATGCCACTGCTGCCGGTGTACGCTTGCACCTCCTGGTCGATGGCAAGGGTGGACGACTGAACGGCGAACGCATCCGGGCT GTGGTGCCGGAATGGCAGTCGGCCAGTTTTTGGTTCTGCGGCCCGCCCGGCTTTGGTCAGGCACTGCGAGAGAATTTCGT TGCCAACGGCTTGCCGCCGGAACGTTTCCATCAGGAACTGTTTCAGATGCGTTGA
Upstream 100 bases:
>100_bases GTTTACACAAAAACTCCTACACGCCCTTCGACGATTTCCGTATTGGTATATCGTTGACCACGTTGGGGAAGGTCATGGGG CATTTCGTCGGAGTTCATTC
Downstream 100 bases:
>100_bases TGACAAGCCGCTTGTTCAGGCACTTCGAGGCCGTGGGAATGGATCGTTCTGGATGCCGATTGCTGGATAAATACCTCCTT GAGGAGGCCCCATGGATTCC
Product: ferric reductase
Products: NA
Alternate protein names: Ferric Reductase Domain-Containing Protein; Flavodoxin Oxidoreductase; Flavocytochrome; Ferric Reductase-Like Transmembrane Component-Like; Ferric Reductase; Ferric Reductase Domain Protein Transmembrane Component; Membrane Flavodoxin Oxidoreductase; Oxidoreductase Membrane Protein; Membrane-Bound Oxidoreductase; Ferredoxin; Flavocytochrome Protein; Hmp Protein; Ferric Reductase Like Transmembrane Component Family; Flavocytochrome Subuit Of Oxidoreductase
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALRPKWLEPHLDGLDKIYRLHKW LGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQTLGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPY HLFVKTHKWLAAAYLALAYHSAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRERLKIGMPVTVEGPYGCFDFE DTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPTTEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRA VVPEWQSASFWFCGPPGFGQALRENFVANGLPPERFHQELFQMR
Sequences:
>Translated_444_residues MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALRPKWLEPHLDGLDKIYRLHKW LGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQTLGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPY HLFVKTHKWLAAAYLALAYHSAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRERLKIGMPVTVEGPYGCFDFE DTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPTTEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRA VVPEWQSASFWFCGPPGFGQALRENFVANGLPPERFHQELFQMR >Mature_444_residues MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALRPKWLEPHLDGLDKIYRLHKW LGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQTLGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPY HLFVKTHKWLAAAYLALAYHSAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRERLKIGMPVTVEGPYGCFDFE DTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPTTEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRA VVPEWQSASFWFCGPPGFGQALRENFVANGLPPERFHQELFQMR
Specific function: Unknown
COG id: COG4097
COG function: function code P; Predicted ferric reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49382; Mature: 49382
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALR CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCC PKWLEPHLDGLDKIYRLHKWLGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCCCHHHH LGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPYHLFVKTHKWLAAAYLALAYH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH SAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE HHHHHHHHHHCCCHHHHHHHHHHCCCHHEEHEECCCCCCCCCHHHHHHHHHCCCHHHHEE TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRE EEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH RLKIGMPVTVEGPYGCFDFEDTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPT HHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCC TEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRAVVPEWQSASFWFCGPPGFGQ CHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCCCCHHHEEECCCCCCCCEEEECCCCHHH ALRENFVANGLPPERFHQELFQMR HHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKRIKISLVAIVLLLTALWLAADTLSPEPFTYFSFRGVFVQYSGVLGIGLMSIAMLLALR CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCC PKWLEPHLDGLDKIYRLHKWLGISALAVSILHWWWAKGTKWMVGWGWLEKPARKPNVDQT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCCCHHHH LGAIEGWLRSQRGLAESIGEWVFYAAVTLIVLALVKRFPYHLFVKTHKWLAAAYLALAYH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH SAVLTKFVYWTQPVGWVLATLLLGGSVAAVLTLTGRIGAGRKVQGTIESLINYPALRVLE HHHHHHHHHHCCCHHHHHHHHHHCCCHHEEHEECCCCCCCCCHHHHHHHHHCCCHHHHEE TTVVLDDGWCGHAAGQFAFVTSDKKEGAHPYTIASAWNPADHRLTFITKALGDHTSRLRE EEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH RLKIGMPVTVEGPYGCFDFEDTQSHQIWIGAGIGITPFVARLKHCAANSDSKTIDLFHPT HHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCC TEFDQTAIDRLTADATAAGVRLHLLVDGKGGRLNGERIRAVVPEWQSASFWFCGPPGFGQ CHHHHHHHHHHHCCCHHCCEEEEEEEECCCCCCCCHHHEEECCCCCCCCEEEECCCCHHH ALRENFVANGLPPERFHQELFQMR HHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA