| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is insC1 [C]
Identifier: 83312426
GI number: 83312426
Start: 3608265
End: 3608663
Strand: Reverse
Name: insC1 [C]
Synonym: amb3327
Alternate gene names: 83312426
Gene position: 3608663-3608265 (Counterclockwise)
Preceding gene: 83312428
Following gene: 83312425
Centisome position: 72.65
GC content: 66.17
Gene sequence:
>399_bases ATGGCATTGATGGTGGCGAATGTGTCCACAAATCCAGTTATGGACACAAATTTGAGAGAGCGTCGGCGGTACCGGTCCTG GCCGGAGGCGCTGAAGCGGGAGATCGTGGCGGCGACGTTCGAGCCGGGAGCCTCGGTCGCGGCGGTGGCCTTGCGCTACG AGGTCAACGCCAATCAGGTGTTCACATGGCGGCGGCGGTTTGGCCCGTCCGGGATCGATGTGATAGCGCCGGGCTTGATG CCGGTGGTGCTGACGGGGGAGGCCGCGCCGCTCGCGGCCTCCATCTCCCCGGATGATCGGATCGAGATCGAACTGGCCGG CGGCTACCGTGTTCGTGTCGGCGGTGATGCCGCCGCCGCGATGCTGCGGCGGGTTCTTGACGTGCTGGAGCGGCGATGA
Upstream 100 bases:
>100_bases TGCGTGTCGCCCAGTCCATGATCGCCGTTAGATACAGGGTACGCCTCCGGTGACGGCCGCCTTCCCCGGCTGATGGGGAA GAGAGAGACTGGCCGCTGGC
Downstream 100 bases:
>100_bases TCCCGGTTCCGAGCAATGTCCGGGTCTGGCTGGCGGTCGGCCGCACCGACATGCGCCGTGGCATGAACGGCCTGGCGCTC CAGGTTCAGGAGACATTGAA
Product: transposase
Products: NA
Alternate protein names: Transposase
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MALMVANVSTNPVMDTNLRERRRYRSWPEALKREIVAATFEPGASVAAVALRYEVNANQVFTWRRRFGPSGIDVIAPGLM PVVLTGEAAPLAASISPDDRIEIELAGGYRVRVGGDAAAAMLRRVLDVLERR
Sequences:
>Translated_132_residues MALMVANVSTNPVMDTNLRERRRYRSWPEALKREIVAATFEPGASVAAVALRYEVNANQVFTWRRRFGPSGIDVIAPGLM PVVLTGEAAPLAASISPDDRIEIELAGGYRVRVGGDAAAAMLRRVLDVLERR >Mature_131_residues ALMVANVSTNPVMDTNLRERRRYRSWPEALKREIVAATFEPGASVAAVALRYEVNANQVFTWRRRFGPSGIDVIAPGLMP VVLTGEAAPLAASISPDDRIEIELAGGYRVRVGGDAAAAMLRRVLDVLERR
Specific function: Involved in the transposition of the insertion sequence is2 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14463; Mature: 14332
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALMVANVSTNPVMDTNLRERRRYRSWPEALKREIVAATFEPGASVAAVALRYEVNANQV CEEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCEE FTWRRRFGPSGIDVIAPGLMPVVLTGEAAPLAASISPDDRIEIELAGGYRVRVGGDAAAA EEEHHHCCCCCCEEECCCCEEEEEECCCCCEEEECCCCCEEEEEECCCEEEEECCHHHHH MLRRVLDVLERR HHHHHHHHHHCC >Mature Secondary Structure ALMVANVSTNPVMDTNLRERRRYRSWPEALKREIVAATFEPGASVAAVALRYEVNANQV EEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHEEEECCCCCCEEEEEEEEECCCCEE FTWRRRFGPSGIDVIAPGLMPVVLTGEAAPLAASISPDDRIEIELAGGYRVRVGGDAAAA EEEHHHCCCCCCEEECCCCEEEEEECCCCCEEEECCCCCEEEEEECCCEEEEECCHHHHH MLRRVLDVLERR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA