| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83312384
Identifier: 83312384
GI number: 83312384
Start: 3561426
End: 3561671
Strand: Reverse
Name: 83312384
Synonym: amb3285
Alternate gene names: NA
Gene position: 3561671-3561426 (Counterclockwise)
Preceding gene: 83312385
Following gene: 83312383
Centisome position: 71.7
GC content: 63.01
Gene sequence:
>246_bases ATGTCTTGGTTTAAGCGCGCCCTTCCGCCGGTCCAGCCCGGGGATCGGTTTGTCAAAATCGGCGACCAGCCCAACAAGGT CTGGGTGGTGTCCCGGGTCTGGGAGACGGTCGACGGGATTCCCCATGTCCGCATGGAGAGCTTCTTGCATCAGGGCGAGA CGCGGATCATTTCCGTCTCGGCGCTGATGGACCTTCGGTTCTTCACGCCTGCCGCACCGGTCGAGCGCGGCGATGACCGG TTCTGA
Upstream 100 bases:
>100_bases CCTGCCGCGAAGCGGGGCTTTTTGCGGCCCGTTAAGGCATCACGCTTTAGCCGACGAATCCCGCCCTGCGCGTGGTATGC TCCTGCCATGGAGTTCAAAC
Downstream 100 bases:
>100_bases GCGTTTCCCTCGCATTCTTTCAGGAATTGACCGCCATGCTGTCCCTCGACGATTTGGCCACCACTTCGCGGATTGTCGCC ATCGATGCCGAGACCACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSWFKRALPPVQPGDRFVKIGDQPNKVWVVSRVWETVDGIPHVRMESFLHQGETRIISVSALMDLRFFTPAAPVERGDDR F
Sequences:
>Translated_81_residues MSWFKRALPPVQPGDRFVKIGDQPNKVWVVSRVWETVDGIPHVRMESFLHQGETRIISVSALMDLRFFTPAAPVERGDDR F >Mature_80_residues SWFKRALPPVQPGDRFVKIGDQPNKVWVVSRVWETVDGIPHVRMESFLHQGETRIISVSALMDLRFFTPAAPVERGDDRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9352; Mature: 9221
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWFKRALPPVQPGDRFVKIGDQPNKVWVVSRVWETVDGIPHVRMESFLHQGETRIISVS CCCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHHHHCCCCEEEEHH ALMDLRFFTPAAPVERGDDRF HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SWFKRALPPVQPGDRFVKIGDQPNKVWVVSRVWETVDGIPHVRMESFLHQGETRIISVS CCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHHHHCCCCEEEEHH ALMDLRFFTPAAPVERGDDRF HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA