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The map label for this gene is tsr [C]

Identifier: 83312366

GI number: 83312366

Start: 3528895

End: 3530892

Strand: Reverse

Name: tsr [C]

Synonym: amb3267

Alternate gene names: 83312366

Gene position: 3530892-3528895 (Counterclockwise)

Preceding gene: 83312367

Following gene: 83312364

Centisome position: 71.08

GC content: 58.11

Gene sequence:

>1998_bases
ATGTTGAGTATCCTAAACAGCCTTCATACGGTTTACGAGGATCGGACGGTTTGCCTTGTCCAATTGGGAACTATGCAGCG
AAACCTTTTCCGTATTCGGGTGCGCCTTCTCAAGATGCTCGATCTGAATGCATATGACGCCACCATGGTGGCACAAATTG
CCGATGCGGAAGAGATTATAAACAAGGAGTGGAAGGCCTATCTTACAACAGAACTTGCGGCAGAGGAGAAAGTCATTGCT
GACAAGATCAAGACAGCACTCCCGGATTATCTCTCTGAAAAAAACAAGGTCATCGAACTCCTAAAGGCAAATGACCCCGA
CAAGGCGACATCCCTGGCAAATGGGCCTGCGCTACAGAAGTTCATGCACCTTGATGAGCAGATTGTTGCCAATATCGAGT
TGCAGGAGCGAATTGCAAAGGAGGAGTATGAGGAGGGAAAGGCGAGTGCCAGTCAAAAGATCAATTTCAGCTTGACCCTT
GGAGGTTTGGCTCTCGCCCTTGGTGCCGCCATCGCCTTTGTCATTGCACGTTCGATTACCGGTCCAGTCAATGGCATCAA
GGGCTGCATGGAGCAGTTGACCGCTGGCAATCTGTCTGCCGAGGTCCCTGGCGTTGATAGGGGCGATGAACTTGGCCAGA
TGGCGAAAGCTGTTGGGGTATTTAAGGAAGGGCTTCTTCGCGTAAAAGAAATGGAGGCCGAGCAGGAGGCGCAGAAAGCC
CGTGCCGAGGCGGAGCGCAAAGCCGCCATGCGCCAGCTCGCCAACACGTTCGAGGGCAGCGTCGGCAAGGTGATCCAGAC
GGTGACCTCCGCCGCCACCCAGCTACAGGTGTCCTCCACCCAGATGGCCAGCACCGCCGCCGAGACCAGCGCCCAGGCAA
CGACCGTGGCCTCGGCCTCCCAACAGGCCTCGGCCAACGTGGAAACTGTCGCCGCCGCCACCGAGGAACTGTCATCCTCC
ATTACTGAAATCGCCAAGCAGGTAGAGCGGTCGCAATCCGTGGCCAGCAGGGCCCAAGATGAGGCCGCCAACACCAACGT
GCAGATTCGGGCGCTGTCCGAGAATGCCAACAAGATCGGTGAGATCGTCAACCTGATCAACGACATCGCCAGCCAGACAA
ACCTGCTGGCGCTTAACGCCACCATCGAGGCCGCCAGGGCCGGCGATGCGGGCAAGGGCTTTGCCGTGGTCGCCAACGAG
GTGAAACACCTCGCCACTCAGACCGGCAAGGCCACTGAGGAGATTGCCTCTCAGATCAGGGCTGTCCAGGACGGCACCAA
CAACGCCGTCCACGCCATTGACGGCATCACCAAGGTGATCAGCGAGATGGGCGAGATTAGCGCCTCTGTCGCCTCGGCAG
TTGAAGAGCAGGCCGCCGCTACCCAGGAGATCGCCCGTAACGTGGAGCAGGCGGCGGCAGGTACCGCCGAAGTTTCTTCC
AGCGTGGTGACCGTGGAGCAGGCGGCAAGGGATACCGGTGCGGCGGCTGAGCAGATTCATTCTGCAGCCACCGACCTGTC
TCAGCAGTCCGAATTCCTTCGCGCCGAGGTTGGGCGCTTCCTAGACCAAGTTCGCTCTGACCAGTCGGATGTGAAACTTC
TGAACTGGGACAACGCCCTGAACATGGGGATTGGCAATATCGACAGGCATCACCGGGAGATGTTTGACGAGGTGAACCGA
CTGTACGCCAAAATGTCCCAGGGTAACGGTGCCGAAGCGGGCCAGGGCATGATCACCCTGATCGACACCGTGATGGGAAG
TCACTTCCGTGAGGAAGAGGAGGTGATGAGCCGGAACAGCTATCCCCATCTGGACGAGCATCGCCGTCATCACCGTGACT
TCCTCGATCGCGCCAAGAGCCACAAGGGCGCGGTCCAGAGCGGCGATCCCACGGCGGCGGCAAAGATGTTCGAGTACGTT
GCGACCTGGCTGACCAACCACATCCAGATGGAGGACGGTAAGCTGGCAAACTACCTCAAGGCCAAGAAGGTCGCTTAG

Upstream 100 bases:

>100_bases
CATGTCACTATCCAATCTCCGCATCTCGATGCGCCTGTCGATCCTGACTGGAGTACTCTGTATCGCTCTCGTCACTACGA
TATTTCTCGGACGGAGCGGT

Downstream 100 bases:

>100_bases
GCTTCTGGCGGCACGTCACTCATTTGAGGGCGTGCCGCCGTGATTCTGGCCGCCATCAGTGGGTCCAGATAAGCGACAGC
CGGAAGAGTTGGAACGAGCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MLSILNSLHTVYEDRTVCLVQLGTMQRNLFRIRVRLLKMLDLNAYDATMVAQIADAEEIINKEWKAYLTTELAAEEKVIA
DKIKTALPDYLSEKNKVIELLKANDPDKATSLANGPALQKFMHLDEQIVANIELQERIAKEEYEEGKASASQKINFSLTL
GGLALALGAAIAFVIARSITGPVNGIKGCMEQLTAGNLSAEVPGVDRGDELGQMAKAVGVFKEGLLRVKEMEAEQEAQKA
RAEAERKAAMRQLANTFEGSVGKVIQTVTSAATQLQVSSTQMASTAAETSAQATTVASASQQASANVETVAAATEELSSS
ITEIAKQVERSQSVASRAQDEAANTNVQIRALSENANKIGEIVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANE
VKHLATQTGKATEEIASQIRAVQDGTNNAVHAIDGITKVISEMGEISASVASAVEEQAAATQEIARNVEQAAAGTAEVSS
SVVTVEQAARDTGAAAEQIHSAATDLSQQSEFLRAEVGRFLDQVRSDQSDVKLLNWDNALNMGIGNIDRHHREMFDEVNR
LYAKMSQGNGAEAGQGMITLIDTVMGSHFREEEEVMSRNSYPHLDEHRRHHRDFLDRAKSHKGAVQSGDPTAAAKMFEYV
ATWLTNHIQMEDGKLANYLKAKKVA

Sequences:

>Translated_665_residues
MLSILNSLHTVYEDRTVCLVQLGTMQRNLFRIRVRLLKMLDLNAYDATMVAQIADAEEIINKEWKAYLTTELAAEEKVIA
DKIKTALPDYLSEKNKVIELLKANDPDKATSLANGPALQKFMHLDEQIVANIELQERIAKEEYEEGKASASQKINFSLTL
GGLALALGAAIAFVIARSITGPVNGIKGCMEQLTAGNLSAEVPGVDRGDELGQMAKAVGVFKEGLLRVKEMEAEQEAQKA
RAEAERKAAMRQLANTFEGSVGKVIQTVTSAATQLQVSSTQMASTAAETSAQATTVASASQQASANVETVAAATEELSSS
ITEIAKQVERSQSVASRAQDEAANTNVQIRALSENANKIGEIVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANE
VKHLATQTGKATEEIASQIRAVQDGTNNAVHAIDGITKVISEMGEISASVASAVEEQAAATQEIARNVEQAAAGTAEVSS
SVVTVEQAARDTGAAAEQIHSAATDLSQQSEFLRAEVGRFLDQVRSDQSDVKLLNWDNALNMGIGNIDRHHREMFDEVNR
LYAKMSQGNGAEAGQGMITLIDTVMGSHFREEEEVMSRNSYPHLDEHRRHHRDFLDRAKSHKGAVQSGDPTAAAKMFEYV
ATWLTNHIQMEDGKLANYLKAKKVA
>Mature_665_residues
MLSILNSLHTVYEDRTVCLVQLGTMQRNLFRIRVRLLKMLDLNAYDATMVAQIADAEEIINKEWKAYLTTELAAEEKVIA
DKIKTALPDYLSEKNKVIELLKANDPDKATSLANGPALQKFMHLDEQIVANIELQERIAKEEYEEGKASASQKINFSLTL
GGLALALGAAIAFVIARSITGPVNGIKGCMEQLTAGNLSAEVPGVDRGDELGQMAKAVGVFKEGLLRVKEMEAEQEAQKA
RAEAERKAAMRQLANTFEGSVGKVIQTVTSAATQLQVSSTQMASTAAETSAQATTVASASQQASANVETVAAATEELSSS
ITEIAKQVERSQSVASRAQDEAANTNVQIRALSENANKIGEIVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANE
VKHLATQTGKATEEIASQIRAVQDGTNNAVHAIDGITKVISEMGEISASVASAVEEQAAATQEIARNVEQAAAGTAEVSS
SVVTVEQAARDTGAAAEQIHSAATDLSQQSEFLRAEVGRFLDQVRSDQSDVKLLNWDNALNMGIGNIDRHHREMFDEVNR
LYAKMSQGNGAEAGQGMITLIDTVMGSHFREEEEVMSRNSYPHLDEHRRHHRDFLDRAKSHKGAVQSGDPTAAAKMFEYV
ATWLTNHIQMEDGKLANYLKAKKVA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=404, Percent_Identity=26.2376237623762, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788194, Length=235, Percent_Identity=34.468085106383, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1787690, Length=268, Percent_Identity=29.1044776119403, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1788195, Length=235, Percent_Identity=29.7872340425532, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1789453, Length=215, Percent_Identity=36.2790697674419, Blast_Score=93, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 71614; Mature: 71614

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50885 HAMP ; PS00550 HEMERYTHRINS ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSILNSLHTVYEDRTVCLVQLGTMQRNLFRIRVRLLKMLDLNAYDATMVAQIADAEEII
CHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NKEWKAYLTTELAAEEKVIADKIKTALPDYLSEKNKVIELLKANDPDKATSLANGPALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHH
FMHLDEQIVANIELQERIAKEEYEEGKASASQKINFSLTLGGLALALGAAIAFVIARSIT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHC
GPVNGIKGCMEQLTAGNLSAEVPGVDRGDELGQMAKAVGVFKEGLLRVKEMEAEQEAQKA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAEAERKAAMRQLANTFEGSVGKVIQTVTSAATQLQVSSTQMASTAAETSAQATTVASAS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQASANVETVAAATEELSSSITEIAKQVERSQSVASRAQDEAANTNVQIRALSENANKIG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
EIVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQTGKATEEIASQIR
HHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVQDGTNNAVHAIDGITKVISEMGEISASVASAVEEQAAATQEIARNVEQAAAGTAEVSS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SVVTVEQAARDTGAAAEQIHSAATDLSQQSEFLRAEVGRFLDQVRSDQSDVKLLNWDNAL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
NMGIGNIDRHHREMFDEVNRLYAKMSQGNGAEAGQGMITLIDTVMGSHFREEEEVMSRNS
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCC
YPHLDEHRRHHRDFLDRAKSHKGAVQSGDPTAAAKMFEYVATWLTNHIQMEDGKLANYLK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AKKVA
HHCCC
>Mature Secondary Structure
MLSILNSLHTVYEDRTVCLVQLGTMQRNLFRIRVRLLKMLDLNAYDATMVAQIADAEEII
CHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NKEWKAYLTTELAAEEKVIADKIKTALPDYLSEKNKVIELLKANDPDKATSLANGPALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHH
FMHLDEQIVANIELQERIAKEEYEEGKASASQKINFSLTLGGLALALGAAIAFVIARSIT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHC
GPVNGIKGCMEQLTAGNLSAEVPGVDRGDELGQMAKAVGVFKEGLLRVKEMEAEQEAQKA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAEAERKAAMRQLANTFEGSVGKVIQTVTSAATQLQVSSTQMASTAAETSAQATTVASAS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQASANVETVAAATEELSSSITEIAKQVERSQSVASRAQDEAANTNVQIRALSENANKIG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
EIVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQTGKATEEIASQIR
HHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
AVQDGTNNAVHAIDGITKVISEMGEISASVASAVEEQAAATQEIARNVEQAAAGTAEVSS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SVVTVEQAARDTGAAAEQIHSAATDLSQQSEFLRAEVGRFLDQVRSDQSDVKLLNWDNAL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
NMGIGNIDRHHREMFDEVNRLYAKMSQGNGAEAGQGMITLIDTVMGSHFREEEEVMSRNS
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCC
YPHLDEHRRHHRDFLDRAKSHKGAVQSGDPTAAAKMFEYVATWLTNHIQMEDGKLANYLK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AKKVA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]