Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83312350

Identifier: 83312350

GI number: 83312350

Start: 3516381

End: 3516719

Strand: Reverse

Name: 83312350

Synonym: amb3251

Alternate gene names: NA

Gene position: 3516719-3516381 (Counterclockwise)

Preceding gene: 83312353

Following gene: 83312343

Centisome position: 70.8

GC content: 57.82

Gene sequence:

>339_bases
ATGTTCCGAGTCATAACTTTTGTGCATAGCAGCATTTTCGCATGGTGGGCGTGTGAACTTCGGGAACCACCTACGCCAAA
AAAACGGGCACAAAGGACGGAGCACGGGATGTTGCTGTTGCGAAGGAGATCGGCAATGCCGAAATTTCTTGTGTCCATTG
CCCGGGATGTGGCCAAGCCCGAGGTCCTTGAAGTGACTGCGGATAATGCGGACGAAGCCCGCTGGATCGCGCTGTCCAGT
TGCGATGCCTGGATGGATGTGGATGCGGGCGCGGTCGCAGTAACCAGGGCCGATGCGCCGGCGGGTCAGGGAACATTGCT
GCTCAAGAGTGCCGCCTAG

Upstream 100 bases:

>100_bases
ATGAGGAGGGGCTCTGGACACTGCGGAACTAGGATAATTTGAAATCCCATTTCCGGAGAAGTGCAAAGTTTGGCGCCCTC
GGGCCGGCAGTCACCCGGAA

Downstream 100 bases:

>100_bases
GGCACATTTTCGATTGCTGGGCCGGGCGGCTAGGGCCGCTCGCCGAGCTTGGCGTGGGCGGCTTTCCATTCCCTCAGCAT
AGTTTTGGCGCCGCGCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MFRVITFVHSSIFAWWACELREPPTPKKRAQRTEHGMLLLRRRSAMPKFLVSIARDVAKPEVLEVTADNADEARWIALSS
CDAWMDVDAGAVAVTRADAPAGQGTLLLKSAA

Sequences:

>Translated_112_residues
MFRVITFVHSSIFAWWACELREPPTPKKRAQRTEHGMLLLRRRSAMPKFLVSIARDVAKPEVLEVTADNADEARWIALSS
CDAWMDVDAGAVAVTRADAPAGQGTLLLKSAA
>Mature_112_residues
MFRVITFVHSSIFAWWACELREPPTPKKRAQRTEHGMLLLRRRSAMPKFLVSIARDVAKPEVLEVTADNADEARWIALSS
CDAWMDVDAGAVAVTRADAPAGQGTLLLKSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12364; Mature: 12364

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRVITFVHSSIFAWWACELREPPTPKKRAQRTEHGMLLLRRRSAMPKFLVSIARDVAKP
CEEEHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
EVLEVTADNADEARWIALSSCDAWMDVDAGAVAVTRADAPAGQGTLLLKSAA
EEEEEECCCCCCEEEEEEECCCCEECCCCCEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MFRVITFVHSSIFAWWACELREPPTPKKRAQRTEHGMLLLRRRSAMPKFLVSIARDVAKP
CEEEHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
EVLEVTADNADEARWIALSSCDAWMDVDAGAVAVTRADAPAGQGTLLLKSAA
EEEEEECCCCCCEEEEEEECCCCEECCCCCEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA